Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 0.0e+00 1080.1 579 100.0
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-158 563.1 544 63.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.1e-158 562.4 544 63.6
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.0e-144 516.9 494 60.7
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.2e-142 508.1 525 60.8
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-136 491.1 464 65.1
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-109 398.7 399 63.2
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-94 351.7 379 55.1
Rhsim09G0046000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-86 323.6 321 58.3
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-69 267.3 279 54.5
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.3e-60 237.7 565 32.4
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.6e-53 213.8 267 44.6
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-44 184.5 332 35.5
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.7e-37 161.0 455 29.5
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-34 152.1 435 29.4
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-25 120.2 269 29.0
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-24 119.0 256 28.1
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-24 116.7 277 27.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-23 114.8 283 27.6
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-23 114.8 278 27.0
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.9e-23 114.4 277 27.1
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-23 113.6 277 27.1
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-23 113.6 277 27.1
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-23 112.8 278 26.6
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-22 112.5 268 29.9
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-22 112.5 283 27.2
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-22 112.5 278 26.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-22 111.3 256 27.3
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-22 110.2 278 26.3
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-22 110.2 299 26.1
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.3e-22 109.8 223 26.0
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.8e-21 107.8 279 26.5
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-19 102.4 247 27.5
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-19 102.1 263 23.6
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 2.0e-19 101.7 258 26.4
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-19 100.9 258 24.8
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.7e-19 100.1 479 22.3
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.7e-19 100.1 272 26.1
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.8e-19 99.4 263 24.0
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 2.9e-18 97.8 258 23.3
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-18 96.7 127 37.8
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-17 95.9 453 23.8
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-17 95.1 145 32.4
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.4e-17 94.7 490 21.6
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.0e-17 93.2 268 25.4
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 7.0e-17 93.2 182 29.1
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-16 90.9 261 25.7
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-16 90.1 233 26.6
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-16 89.7 221 28.1
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-15 89.4 242 24.4
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-15 88.2 261 25.3
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-15 88.2 260 26.2
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.3e-15 88.2 153 29.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.9e-15 87.4 450 23.3
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-15 86.7 260 25.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-15 86.7 233 26.2
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.6e-15 86.7 259 27.0
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-14 85.9 223 29.1
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 2.5e-14 84.7 148 33.1
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-13 82.0 482 21.4
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.0e-13 79.7 286 23.1
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 6.8e-12 76.6 148 28.4
Rhsim04G0140700 Rhododendron simsii HOM05D011841 ORTHO05D001590 8.9e-12 76.3 161 50.3
Rhsim04G0141300 Rhododendron simsii HOM05D011841 ORTHO05D001590 8.9e-12 76.3 161 50.3
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 8.3e-10 69.7 100 35.0
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-09 67.8 104 35.6
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-09 67.8 107 33.6
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 9.2e-09 66.2 249 22.1
Rhsim10G0001000 Rhododendron simsii HOM05D011841 ORTHO05D001590 1.6e-08 65.5 79 81.0
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.6e-08 65.5 165 26.1
Rhsim11G0077700 Rhododendron simsii HOM05D011841 ORTHO05D001590 3.5e-08 64.3 122 58.2
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.6e-08 63.9 165 26.1
vmacro05424 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.6e-08 63.9 145 26.2
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 6.0e-08 63.5 263 19.4
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 7.8e-08 63.2 182 25.3
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.3e-07 62.4 75 40.0
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-07 61.6 169 27.2
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 3.0e-07 61.2 152 25.0
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 3.9e-07 60.8 242 23.6
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-07 60.5 108 28.7
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 6.6e-07 60.1 97 30.9
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 8.6e-07 59.7 71 39.4
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 8.6e-07 59.7 71 39.4
Rhsim03G0107500 Rhododendron simsii HOM05D011841 ORTHO05D339411 1.5e-06 58.9 108 36.1
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.5e-06 58.9 97 29.9
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 1.9e-06 58.5 279 22.2


User provided reference genes

Program Settings