Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 4.7e-108 394.4 183 100.0
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.1e-23 113.2 136 50.0
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 4.5e-18 95.5 144 45.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.2e-16 89.4 179 34.6
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-15 87.4 129 41.1
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-13 79.3 129 38.8
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.7e-13 78.6 134 38.8
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-13 78.2 142 36.6
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.6e-12 77.0 150 36.0
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 2.8e-12 76.3 135 36.3
Rhsim12G0034800 Rhododendron simsii HOM05D042119 ORTHO05D007789 4.8e-12 75.5 148 35.1
vmacro12690 Vaccinium macrocarpon HOM05D063190 ORTHO05D050702 1.1e-11 74.3 51 70.6
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.8e-11 73.6 156 34.6
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 3.1e-11 72.8 132 35.6
Rhsim10G0158100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-10 70.1 128 38.3
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-10 70.1 141 33.3
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.5e-10 68.9 134 39.6
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.9e-10 68.6 137 33.6
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.9e-10 68.6 128 39.1
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.0e-09 67.8 116 38.8
Rhsim06G0172100 Rhododendron simsii HOM05D000032 ORTHO05D009914 1.7e-09 67.0 129 34.9
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.0e-09 65.5 138 33.3
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 5.0e-09 65.5 112 36.6
Rhsim06G0059100 Rhododendron simsii HOM05D031946 ORTHO05D007789 6.5e-09 65.1 112 42.0
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.4e-08 63.9 138 33.3
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.2e-08 62.8 80 45.0
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 4.2e-08 62.4 139 35.3
Rhsim06G0060500 Rhododendron simsii HOM05D031946 ORTHO05D007789 5.5e-08 62.0 128 36.7
DCAR_008845 Daucus carota HOM05D014660 ORTHO05D016977 9.4e-08 61.2 122 32.8
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 1.2e-07 60.8 138 35.5
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.6e-07 60.5 134 36.6
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.1e-07 60.1 125 32.0
DCAR_019885 Daucus carota HOM05D014660 ORTHO05D016977 1.4e-06 57.4 117 33.3
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 1.4e-06 57.4 129 33.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-06 57.0 131 35.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.8e-06 57.0 122 34.4
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.8e-06 57.0 134 32.8
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 1.8e-06 57.0 128 30.5
DCAR_027027 Daucus carota HOM05D014660 ORTHO05D016977 2.3e-06 56.6 113 36.3
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.3e-06 56.6 130 33.1
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 3.0e-06 56.2 125 35.2
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.1e-06 55.5 104 34.6


User provided reference genes

Program Settings