Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0149300 Rhododendron simsii HOM05D011850 ORTHO05D011180 6.8e-176 620.5 311 100.0
vmacro17588 Vaccinium macrocarpon HOM05D011850 ORTHO05D011180 3.8e-118 428.7 311 72.3
Actinidia09246 Actinidia chinensis HOM05D011850 ORTHO05D011180 3.4e-82 309.3 318 54.4
Actinidia04846 Actinidia chinensis HOM05D011850 ORTHO05D011180 6.6e-54 215.3 199 61.3
Dinv10687 Davidia involucrata HOM05D011850 ORTHO05D011180 6.0e-39 165.6 320 37.2
Dinv38781 Davidia involucrata HOM05D011850 ORTHO05D011180 2.2e-33 147.1 288 36.1
Lj9A469T61 Lonicera japonica HOM05D011850 ORTHO05D011180 1.6e-31 141.0 241 39.8
Hund02609 Selenicereus undatus HOM05D011850 ORTHO05D011180 6.6e-22 109.0 217 35.9
vmacro17589 Vaccinium macrocarpon HOM05D011850 ORTHO05D011180 9.9e-18 95.1 65 70.8
CSS0044149 Camellia sinensis var. sinensis HOM05D012515 ORTHO05D011180 1.2e-15 88.2 95 48.4
CSS0006694 Camellia sinensis var. sinensis HOM05D011850 ORTHO05D011180 2.5e-13 80.5 195 33.8
Actinidia26233 Actinidia chinensis HOM05D012515 ORTHO05D011180 3.3e-13 80.1 85 52.9
Hund02612 Selenicereus undatus HOM05D011850 ORTHO05D011180 3.3e-13 80.1 91 49.5
Nitab4.5_0001591g0150 Nicotiana tabacum HOM05D012515 ORTHO05D011180 1.4e-11 74.7 103 47.6
Nitab4.5_0000568g0180 Nicotiana tabacum HOM05D012515 ORTHO05D011180 2.4e-11 73.9 151 35.8
Hund02610 Selenicereus undatus HOM05D011850 ORTHO05D011180 2.4e-11 73.9 214 29.9
CAN.G206.177 Capsicum annuum HOM05D012515 ORTHO05D011180 4.0e-11 73.2 98 43.9
Rhsim08G0071600 Rhododendron simsii HOM05D012515 ORTHO05D011180 2.0e-10 70.9 85 45.9
Peaxi162Scf00166g01037 Petunia axillaris HOM05D012515 ORTHO05D011180 2.2e-09 67.4 85 44.7
Solyc02g088280.3 Solanum lycopersicum HOM05D012515 ORTHO05D011180 2.2e-09 67.4 81 44.4
Sopen02g032970 Solanum pennellii HOM05D012515 ORTHO05D011180 2.2e-09 67.4 81 44.4
PGSC0003DMG403001341 Solanum tuberosum HOM05D012515 ORTHO05D011180 2.9e-09 67.0 81 44.4
Lsat_1_v5_gn_9_33841 Lactuca sativa HOM05D017474 ORTHO05D011180 1.1e-08 65.1 179 30.7
Actinidia28651 Actinidia chinensis HOM05D011850 ORTHO05D011180 1.9e-08 64.3 190 28.9
GSVIVG01011462001 Vitis vinifera HOM05D012515 ORTHO05D011180 9.3e-08 62.0 102 36.3
Lj1A1233G67 Lonicera japonica HOM05D012515 ORTHO05D011180 1.6e-07 61.2 116 34.5
Hund02611 Selenicereus undatus HOM05D011850 ORTHO05D011180 3.5e-07 60.1 136 31.6


User provided reference genes

Program Settings