Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 8.9e-207 723.4 370 100.0
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 1.7e-120 436.8 379 62.5
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 8.2e-120 434.5 379 63.3
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 1.7e-109 400.2 381 58.8
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 7.0e-95 351.7 373 54.4
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 2.0e-94 350.1 388 52.6
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 8.6e-93 344.7 382 53.4
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 1.9e-92 343.6 395 52.2
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 5.6e-92 342.0 389 52.2
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 5.6e-92 342.0 388 53.4
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 8.9e-90 334.7 388 50.3
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 9.8e-89 331.3 393 50.4
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 2.4e-87 326.6 383 49.3
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 5.4e-87 325.5 375 51.2
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 5.4e-87 325.5 412 49.3
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 5.4e-87 325.5 373 49.6
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 1.2e-86 324.3 371 50.1
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 1.6e-86 323.9 381 50.1
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 3.5e-86 322.8 387 49.6
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 1.3e-85 320.9 390 48.7
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 1.1e-84 317.8 382 49.2
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 3.3e-84 316.2 381 48.6
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 9.5e-84 314.7 384 50.0
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.6e-83 313.9 379 48.8
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 2.1e-83 313.5 392 48.0
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 2.1e-83 313.5 385 48.3
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 3.6e-83 312.8 351 51.6
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 6.2e-83 312.0 379 49.1
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 1.0e-82 311.2 387 47.5
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 1.0e-82 311.2 376 50.5
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 1.4e-82 310.8 377 48.3
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 1.4e-82 310.8 358 48.9
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 1.8e-82 310.5 380 47.1
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 5.2e-82 308.9 356 50.0
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 6.8e-82 308.5 351 51.0
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 8.9e-82 308.1 351 51.6
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 1.2e-81 307.8 350 50.6
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 1.2e-81 307.8 352 51.1
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 2.6e-81 306.6 387 48.8
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 9.8e-81 304.7 351 50.7
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 1.7e-80 303.9 335 50.7
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 1.7e-80 303.9 335 50.7
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 6.4e-80 302.0 247 63.6
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 3.2e-79 299.7 378 47.9
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 5.4e-79 298.9 388 49.0
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 9.2e-79 298.1 365 48.2
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 9.2e-79 298.1 365 48.2
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 1.6e-78 297.4 352 50.0
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 1.6e-78 297.4 387 45.2
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 1.6e-78 297.4 384 47.7
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 2.0e-78 297.0 322 51.9
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 2.7e-78 296.6 409 46.5
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 1.3e-77 294.3 385 47.0
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 1.3e-77 294.3 351 47.9
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 1.7e-77 293.9 353 48.4
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 2.3e-77 293.5 373 46.4
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 8.6e-77 291.6 370 46.2
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 1.5e-76 290.8 352 47.4
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 2.5e-76 290.0 341 49.0
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 7.3e-76 288.5 380 46.3
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 9.5e-76 288.1 358 48.9
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 6.8e-74 282.0 398 44.7
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 1.2e-73 281.2 375 45.9
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 1.2e-73 281.2 330 48.2
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 2.9e-72 276.6 370 45.1
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 3.7e-72 276.2 397 46.3
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 6.4e-72 275.4 352 47.7
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 3.2e-71 273.1 393 43.5
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 5.4e-71 272.3 262 54.2
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 7.1e-71 271.9 302 51.0
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 1.6e-70 270.8 307 50.2
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 1.6e-70 270.8 307 50.2
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 2.1e-70 270.4 271 55.0
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 3.5e-70 269.6 245 57.1
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 4.6e-70 269.2 292 49.0
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 3.3e-68 263.1 243 60.5
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 7.3e-68 261.9 391 42.2
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 4.0e-66 256.1 305 47.5
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 5.2e-66 255.8 388 42.5
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 7.6e-65 251.9 383 42.0
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 1.3e-64 251.1 300 48.7
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.7e-64 250.8 389 42.4
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 1.2e-62 244.6 307 45.9
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 1.6e-62 244.2 315 46.7
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 4.3e-60 236.1 249 51.4
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.1e-59 233.8 388 40.5
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 6.2e-59 232.3 242 52.1
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 8.1e-59 231.9 387 39.8
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.1e-58 229.9 368 40.8
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 4.0e-58 229.6 367 42.0
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 5.2e-58 229.2 209 57.9
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 5.8e-57 225.7 322 40.1
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 3.8e-56 223.0 337 41.8
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 6.4e-56 222.2 376 41.0
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 4.2e-55 219.5 376 41.0
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 7.1e-55 218.8 356 37.9
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 9.3e-55 218.4 375 40.8
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 2.2e-48 197.2 241 43.2
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 3.8e-48 196.4 336 37.5
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 1.4e-47 194.5 395 35.9
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 7.1e-47 192.2 238 46.6
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 1.2e-46 191.4 237 45.1
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 1.6e-46 191.0 296 41.6
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.7e-45 187.6 130 71.5
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 6.2e-43 179.1 338 36.7
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 6.2e-43 179.1 229 44.5
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 1.8e-42 177.6 275 38.2
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 6.9e-42 175.6 354 36.2
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 4.5e-41 172.9 326 36.2
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 9.9e-41 171.8 133 63.9
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 1.3e-40 171.4 369 37.1
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 1.7e-40 171.0 194 50.5
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 6.4e-40 169.1 237 41.4
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 7.1e-39 165.6 284 39.1
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 1.2e-38 164.9 124 67.7
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 6.0e-38 162.5 384 32.8
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 7.9e-38 162.2 329 34.7
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 1.3e-37 161.4 338 35.5
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.0e-37 160.2 265 38.9
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 2.5e-36 157.1 330 34.5
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 4.3e-36 156.4 286 35.7
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 6.2e-35 152.5 283 35.3
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 6.9e-34 149.1 102 77.5
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 2.0e-33 147.5 279 34.8
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 3.4e-33 146.7 203 43.8
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 3.8e-32 143.3 226 38.9
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 1.9e-31 141.0 249 34.9
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 2.5e-31 140.6 219 42.9
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 5.5e-31 139.4 331 34.1
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 2.7e-30 137.1 129 58.9
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 7.9e-30 135.6 312 34.3
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 1.1e-28 131.7 285 31.2
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 4.3e-28 129.8 395 30.6
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 7.4e-28 129.0 311 32.8
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 1.6e-27 127.9 143 49.7
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 3.7e-27 126.7 182 45.6
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 1.3e-24 118.2 154 41.6
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 1.8e-21 107.8 76 68.4
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 8.7e-21 105.5 109 51.4
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 1.9e-20 104.4 70 67.1
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 3.3e-20 103.6 151 36.4
Dinv17434 Davidia involucrata HOM05D004908 ORTHO05D006418 4.1e-18 96.7 100 56.0
FvH4_5g13610 Fragaria vesca HOM05D004908 ORTHO05D006418 1.4e-13 81.6 73 60.3
BolC6t39863H Brassica oleracea HOM05D004908 ORTHO05D039080 2.3e-13 80.9 203 32.0
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-12 78.2 133 30.8
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 5.0e-08 63.2 128 31.2
RcHm_v2.0_Chr6g0263661 Rosa chinensis HOM05D004908 ORTHO05D006418 1.9e-07 61.2 50 58.0
MELO3C034996.2 Cucumis melo HOM05D004908 ORTHO05D006418 1.2e-06 58.5 39 69.2
Gohir.A07G149500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 6.1e-06 56.2 40 57.5


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