Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0143700 Rhododendron simsii HOM05D007385 ORTHO05D009349 1.9e-127 459.1 230 100.0
Rhsim02G0022600 Rhododendron simsii HOM05D007385 ORTHO05D009349 6.9e-117 424.1 243 88.9
CSS0026709 Camellia sinensis var. sinensis HOM05D007385 ORTHO05D009349 1.7e-91 339.7 243 70.0
Dinv22764 Davidia involucrata HOM05D007385 ORTHO05D009349 8.2e-78 294.3 240 60.8
Actinidia04811 Actinidia chinensis HOM05D007385 ORTHO05D009349 6.5e-75 284.6 243 63.4
QL10p019987 Quercus lobata HOM05D007385 ORTHO05D009349 2.8e-70 269.2 243 54.7
RcHm_v2.0_Chr7g0183331 Rosa chinensis HOM05D007385 ORTHO05D009349 1.3e-67 260.4 243 52.3
FAN13G1154 Fragaria x ananassa HOM05D007385 ORTHO05D009349 2.3e-67 259.6 243 52.3
Hma1.2p1_0322F.1_g124600 Hydrangea macrophylla HOM05D007385 ORTHO05D009349 5.5e-66 255.0 247 55.5
Cfa019356 Carpinus fangiana HOM05D007385 ORTHO05D009349 4.7e-65 251.9 243 53.1
Haze_07747 Corylus avellana HOM05D007385 ORTHO05D009349 4.7e-65 251.9 243 53.5
Thecc.04G178800 Theobroma cacao HOM05D007385 ORTHO05D009349 4.7e-65 251.9 243 50.6
MSTRG.11333 Avicennia marina HOM05D007385 ORTHO05D009349 2.0e-63 246.5 243 50.6
CiPaw.11G055800 Carya illinoinensis HOM05D007385 ORTHO05D009349 2.0e-63 246.5 243 50.2
EL10Ac5g11161 Beta vulgaris HOM05D007385 ORTHO05D009349 9.8e-63 244.2 243 48.6
Ah.01g002510 Amaranthus hybridus HOM05D007385 ORTHO05D009349 1.3e-62 243.8 243 49.8
Ciclev10020129m.g Citrus clementina HOM05D007385 ORTHO05D009349 2.8e-62 242.7 243 50.6
SalBow5G4421 Salvia bowleyana HOM05D007385 ORTHO05D009349 2.8e-62 242.7 243 51.0
GSVIVG01008120001 Vitis vinifera HOM05D007385 ORTHO05D009349 3.7e-62 242.3 241 51.0
TAR626G0510 Trochodendron aralioides HOM05D007385 ORTHO05D009349 8.3e-62 241.1 243 53.5
Manes.14G087500 Manihot esculenta HOM05D007385 ORTHO05D009349 1.1e-61 240.7 243 47.7
Lsat_1_v5_gn_5_22980 Lactuca sativa HOM05D007385 ORTHO05D009349 1.4e-61 240.4 243 48.1
AUR62021530 Chenopodium quinoa HOM05D007385 ORTHO05D009349 3.1e-61 239.2 236 49.2
Potri.018G051600 Populus trichocarpa HOM05D007385 ORTHO05D009349 4.1e-61 238.8 242 48.8
Lsat_1_v5_gn_5_22940 Lactuca sativa HOM05D007385 ORTHO05D009349 1.6e-60 236.9 242 47.9
Cpa.g.sc94.76 Carica papaya HOM05D007385 ORTHO05D009349 4.5e-60 235.3 241 49.8
Sabra18G0048200 Salix brachista HOM05D007385 ORTHO05D009349 4.5e-60 235.3 242 48.3
HanXRQChr08g0230411 Helianthus annuus HOM05D007385 ORTHO05D009349 5.9e-60 235.0 243 48.1
COL.COLO4_07677 Corchorus olitorius HOM05D007385 ORTHO05D009349 1.7e-59 233.4 243 49.0
Aqoxy3G03653 Aquilegia oxysepala HOM05D007385 ORTHO05D009349 4.3e-58 228.8 243 47.7
AT1G74120 Arabidopsis thaliana HOM05D007385 ORTHO05D009349 4.3e-58 228.8 244 48.4
AL2G34030 Arabidopsis lyrata HOM05D007385 ORTHO05D009349 2.8e-57 226.1 243 48.1
Gorai.011G295100 Gossypium raimondii HOM05D007385 ORTHO05D009349 3.6e-57 225.7 243 46.9
FAN08G0404 Fragaria x ananassa HOM05D007385 ORTHO05D009349 8.0e-57 224.6 243 48.1
FvH4_5g13630 Fragaria vesca HOM05D007385 ORTHO05D009349 3.1e-56 222.6 198 55.1
CANSAT78G0918 Cannabis sativa HOM05D007385 ORTHO05D009349 6.8e-56 221.5 242 47.9
Prupe.5G207400 Prunus persica HOM05D007385 ORTHO05D009349 1.5e-55 220.3 243 45.7
CARHR067280 Cardamine hirsuta HOM05D007385 ORTHO05D009349 2.0e-55 219.9 243 46.1
Sp5g29350 Schrenkiella parvula HOM05D007385 ORTHO05D009349 2.0e-55 219.9 243 46.9
Carub.0002s2092 Capsella rubella HOM05D007385 ORTHO05D009349 4.4e-55 218.8 243 45.7
Duzib212G0687 Durio zibethinus HOM05D007385 ORTHO05D009349 7.5e-55 218.0 243 47.3
FAN18G0626 Fragaria x ananassa HOM05D007385 ORTHO05D009349 7.5e-55 218.0 198 54.5
AUR62039653 Chenopodium quinoa HOM05D007385 ORTHO05D009349 1.3e-54 217.2 212 48.6
Thhalv10018549m.g Eutrema salsugineum HOM05D007385 ORTHO05D009349 1.3e-54 217.2 244 45.1
Lalb_Chr11g0068081 Lupinus albus HOM05D007385 ORTHO05D009349 4.9e-54 215.3 244 46.3
BolC6t39859H Brassica oleracea HOM05D007385 ORTHO05D009349 1.1e-53 214.2 243 44.9
Sc04g0004300 Simmondsia chinensis HOM05D007385 ORTHO05D009349 1.1e-53 214.2 243 44.4
BcaC08g46845 Brassica carinata HOM05D007385 ORTHO05D009349 1.9e-53 213.4 243 45.3
ClCG03G008530 Citrullus lanatus HOM05D007385 ORTHO05D009349 1.9e-53 213.4 243 44.9
MD14G1214100 Malus domestica HOM05D007385 ORTHO05D009349 1.9e-53 213.4 243 45.3
PGR083G1273 Punica granatum HOM05D007385 ORTHO05D009349 1.9e-53 213.4 243 45.7
Sed0022204 Sechium edule HOM05D007385 ORTHO05D009349 1.9e-53 213.4 243 46.1
arahy.Tifrunner.gnm1.ann1.AV1VK7 Arachis hypogaea HOM05D007385 ORTHO05D009349 3.2e-53 212.6 242 46.7
BcaC08g46812 Brassica carinata HOM05D007385 ORTHO05D009349 3.2e-53 212.6 243 45.7
BcaC08g46816 Brassica carinata HOM05D007385 ORTHO05D009349 3.2e-53 212.6 243 44.0
Atru.chr9.516 Acer truncatum HOM05D007385 ORTHO05D009349 5.4e-53 211.8 202 54.0
Psat1g128320 Pisum sativum HOM05D007385 ORTHO05D009349 5.4e-53 211.8 243 47.7
Lj5E134T0 Lonicera japonica HOM05D007385 ORTHO05D009349 7.0e-53 211.5 191 55.5
arahy.Tifrunner.gnm1.ann1.9FHV3M Arachis hypogaea HOM05D007385 ORTHO05D009349 1.6e-52 210.3 242 45.9
C06p48270 Brassica napus HOM05D007385 ORTHO05D009349 1.6e-52 210.3 243 45.3
THA.LOC104812111 Tarenaya hassleriana HOM05D007385 ORTHO05D009349 2.0e-52 209.9 243 44.9
Aa31LG4G4430 Aethionema arabicum HOM05D007385 ORTHO05D009349 1.7e-51 206.8 243 43.6
MBI16_g10855_MAGBIO Magnolia biondii HOM05D007385 ORTHO05D009349 3.0e-51 206.1 243 43.6
A07p40010 Brassica napus HOM05D007385 ORTHO05D009349 3.9e-51 205.7 243 43.6
BraA07t31546Z Brassica rapa HOM05D007385 ORTHO05D009349 3.9e-51 205.7 243 43.6
MELO3C002869.2 Cucumis melo HOM05D007385 ORTHO05D009349 5.0e-51 205.3 243 44.0
SHI17456 Sapria himalayana HOM05D007385 ORTHO05D009349 1.1e-50 204.1 243 42.8
SGA_v2.0_scaffold28G11738 Striga asiatica HOM05D007385 ORTHO05D009349 1.1e-50 204.1 244 45.1
SGA_v2.0_scaffold733G53530 Striga asiatica HOM05D007385 ORTHO05D009349 1.1e-50 204.1 244 45.1
Medtr2g061450 Medicago truncatula HOM05D007385 ORTHO05D009349 1.9e-50 203.4 243 47.3
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 1.9e-50 203.4 249 45.0
Peaxi162Scf00251g00117 Petunia axillaris HOM05D007385 ORTHO05D009349 4.3e-50 202.2 244 43.9
Sopen09g035860 Solanum pennellii HOM05D007385 ORTHO05D009349 1.2e-49 200.7 246 44.7
Nitab4.5_0000309g0300 Nicotiana tabacum HOM05D007385 ORTHO05D009349 8.0e-49 198.0 245 46.1
Solyc09g097920.3 Solanum lycopersicum HOM05D007385 ORTHO05D009349 4.0e-48 195.7 246 43.9
PGSC0003DMG400016606 Solanum tuberosum HOM05D007385 ORTHO05D009349 6.8e-48 194.9 245 43.3
CAN.G681.4 Capsicum annuum HOM05D007385 ORTHO05D009349 1.5e-47 193.7 245 43.3
Lj2g0011212 Lotus japonicus HOM05D007385 ORTHO05D009349 9.8e-47 191.0 243 44.9
Migut.L01399 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.3e-46 190.7 197 48.7
Ca_29560_v3 Cicer arietinum L. HOM05D007385 ORTHO05D009349 1.2e-44 184.1 198 48.5
VMungo1309G0993 Vigna mungo HOM05D007385 ORTHO05D009349 1.2e-41 174.1 244 41.0
Nitab4.5_0000309g0070 Nicotiana tabacum HOM05D007385 ORTHO05D009349 2.8e-41 172.9 244 41.4
Phvul.009G202900 Phaseolus vulgaris HOM05D007385 ORTHO05D009349 4.7e-41 172.2 244 39.8
CsaV3_1G037600 Cucumis sativus L. HOM05D007385 ORTHO05D009349 1.8e-40 170.2 198 43.9
Glyma.04G160400 Glycine max HOM05D007385 ORTHO05D009349 3.1e-40 169.5 221 43.0
Gohir.D10G254100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 1.9e-37 160.2 151 52.3
Gohir.A10G242100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 1.6e-36 157.1 151 51.7
HPP92_019471 Vanilla planifolia HOM05D007385 ORTHO05D009349 1.0e-35 154.5 241 37.3
Migut.H01127 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.1e-34 151.0 194 42.3
COL.COLO4_37709 Corchorus olitorius HOM05D007385 ORTHO05D009349 1.1e-32 144.4 150 48.7
Oeu014423.1 Olea europaea HOM05D007385 ORTHO05D009349 6.4e-30 135.2 144 47.9
Migut.H01126 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.4e-29 134.0 130 53.1
ATR0680G420 Amborella trichopoda HOM05D007385 ORTHO05D009349 2.1e-28 130.2 277 30.3
CANSAT78G2199 Cannabis sativa HOM05D007385 ORTHO05D009349 2.1e-28 130.2 162 42.6
ECA246G0832 Erigeron canadensis HOM05D007385 ORTHO05D009349 1.6e-17 94.0 99 47.5
Actinidia10453 Actinidia chinensis HOM05D007385 ORTHO05D009349 2.8e-17 93.2 67 67.2
Migut.H01128 Erythranthe guttata HOM05D007385 ORTHO05D009349 9.0e-16 88.2 110 43.6
Nitab4.5_0001689g0090 Nicotiana tabacum HOM05D007385 ORTHO05D009349 5.8e-15 85.5 111 40.5
Migut.H01129 Erythranthe guttata HOM05D007385 ORTHO05D009349 1.2e-12 77.8 118 35.6
Zm00001eb136360 Zea mays HOM05D007385 ORTHO05D009349 6.2e-09 65.5 75 41.3
Os12g0490000 Oryza sativa ssp. japonica HOM05D007385 ORTHO05D009349 8.1e-09 65.1 68 41.2


User provided reference genes

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