Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.2e-153 546.6 298 100.0
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 1.5e-47 194.1 266 53.4
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 9.8e-47 191.4 266 46.6
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 8.5e-43 178.3 266 48.5
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 8.3e-38 161.8 293 38.6
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 2.3e-35 153.7 266 38.3
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 3.8e-35 152.9 266 43.6
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 5.0e-35 152.5 266 41.0
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 6.6e-35 152.1 268 37.7
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 6.6e-35 152.1 268 37.7
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 2.5e-34 150.2 275 37.8
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 7.3e-34 148.7 266 39.1
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 1.2e-33 147.9 272 37.1
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 3.6e-33 146.4 266 36.8
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 6.1e-33 145.6 268 37.7
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 8.0e-33 145.2 266 38.3
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.5e-31 141.0 273 35.9
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 4.4e-31 139.4 271 41.3
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 2.9e-30 136.7 266 35.7
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.1e-29 134.8 266 42.9
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 3.2e-29 133.3 266 36.1
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 5.4e-29 132.5 280 34.6
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.2e-28 131.3 266 36.1
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 2.7e-28 130.2 266 37.6
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 7.8e-28 128.6 267 33.7
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.3e-27 127.9 266 35.3
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 5.0e-27 125.9 266 38.7
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 5.0e-27 125.9 277 33.9
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 6.6e-27 125.6 286 32.2
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.6e-27 125.2 286 32.2
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 8.6e-27 125.2 268 40.3
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.9e-26 124.0 269 34.6
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 2.5e-26 123.6 268 39.2
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 2.5e-26 123.6 266 38.3
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 4.3e-26 122.9 108 56.5
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 9.5e-26 121.7 287 32.4
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.2e-25 121.3 266 34.2
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 2.1e-25 120.6 261 32.6
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.8e-25 120.2 266 39.5
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 8.0e-25 118.6 266 38.3
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.4e-24 117.9 266 34.2
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 5.2e-24 115.9 269 33.1
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 8.9e-24 115.2 265 38.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.5e-23 114.4 307 30.9
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.0e-23 114.0 287 31.7
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 7.5e-23 112.1 261 31.0
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 7.5e-23 112.1 100 57.0
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.7e-22 110.9 266 30.8
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 3.7e-22 109.8 267 30.7
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 4.9e-22 109.4 98 59.2
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 4.9e-22 109.4 266 31.2
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 6.4e-22 109.0 261 38.3
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 1.1e-21 108.2 261 31.4
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 4.1e-21 106.3 266 29.7
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 7.0e-21 105.5 313 34.8
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 9.2e-21 105.1 266 37.6
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 2.0e-20 104.0 98 55.1
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.7e-19 100.9 261 33.7
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 2.3e-19 100.5 261 34.9
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 3.0e-19 100.1 261 29.5
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 6.6e-19 99.0 266 28.9
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.1e-18 98.2 265 29.8
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 1.5e-18 97.8 200 36.5
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.3e-18 96.7 261 35.2
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.3e-18 96.7 261 35.2
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 3.3e-18 96.7 265 29.1
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 8.1e-17 92.0 261 34.1
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 8.1e-17 92.0 261 34.1
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 8.1e-17 92.0 261 34.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 8.1e-17 92.0 268 29.5
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.1e-16 91.7 261 31.0
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.0e-16 89.7 64 70.3
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.0e-16 89.7 64 70.3
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 3.4e-15 86.7 261 34.9
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.4e-13 81.3 76 57.9
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.4e-13 81.3 76 57.9
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 5.4e-13 79.3 266 29.7
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 3.9e-11 73.2 74 63.5
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 6.6e-11 72.4 266 26.3
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.9e-10 70.9 78 47.4
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 5.6e-10 69.3 90 45.6
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 1.6e-09 67.8 88 39.8
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.8e-09 67.0 78 70.5
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 6.8e-08 62.4 79 41.8
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 6.8e-08 62.4 263 25.5
Glyma.12G008800 Glycine max HOM05D007696 ORTHO05D009719 2.0e-07 60.8 45 57.8
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 8.4e-06 55.5 70 54.3


User provided reference genes

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