Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0135700 Rhododendron simsii HOM05D005318 ORTHO05D006791 7.1e-47 190.3 97 100.0
vmacro07764 Vaccinium macrocarpon HOM05D005318 ORTHO05D006791 1.2e-09 66.6 48 77.1
Actinidia37854 Actinidia chinensis HOM05D005318 ORTHO05D006791 7.6e-09 63.9 36 88.9
CSS0014915 Camellia sinensis var. sinensis HOM05D005318 ORTHO05D006791 1.0e-08 63.5 48 70.8
RhsimUnG0019600 Rhododendron simsii HOM05D005318 ORTHO05D006791 1.3e-08 63.2 36 88.9
Ca_08698_v3 Cicer arietinum L. HOM05D005318 ORTHO05D006791 8.5e-08 60.5 36 80.6
Medtr7g088740 Medicago truncatula HOM05D005318 ORTHO05D006791 8.5e-08 60.5 36 80.6
AL4G38790 Arabidopsis lyrata HOM05D005318 ORTHO05D006791 1.4e-07 59.7 36 80.6
Thhalv10016195m.g Eutrema salsugineum HOM05D005318 ORTHO05D006791 1.4e-07 59.7 36 80.6
Lalb_Chr14g0365451 Lupinus albus HOM05D005318 ORTHO05D006791 1.9e-07 59.3 36 77.8
Dinv26400 Davidia involucrata HOM05D005318 ORTHO05D006791 2.5e-07 58.9 36 83.3
Glyma.19G125800 Glycine max HOM05D005318 ORTHO05D006791 3.2e-07 58.5 36 77.8
Prupe.7G019400 Prunus persica HOM05D005318 ORTHO05D006791 3.2e-07 58.5 36 80.6
CARHR135960 Cardamine hirsuta HOM05D005318 ORTHO05D006791 4.2e-07 58.2 36 80.6
AT2G40840 Arabidopsis thaliana HOM05D005318 ORTHO05D006791 5.5e-07 57.8 34 82.4
Migut.K00161 Erythranthe guttata HOM05D005318 ORTHO05D006791 5.5e-07 57.8 44 68.2
Lj1g0025305 Lotus japonicus HOM05D005318 ORTHO05D006791 5.5e-07 57.8 41 73.2
Oeu064748.1 Olea europaea HOM05D005318 ORTHO05D006791 5.5e-07 57.8 36 77.8
TPR.G23186 Trifolium pratense HOM05D005318 ORTHO05D006791 5.5e-07 57.8 36 77.8
Psat0s698g0160 Pisum sativum HOM05D005318 ORTHO05D006791 7.2e-07 57.4 36 77.8
ClCG04G005890 Citrullus lanatus HOM05D005318 ORTHO05D006791 1.2e-06 56.6 36 75.0
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 1.2e-06 56.6 36 75.0
Sed0003650 Sechium edule HOM05D005318 ORTHO05D006791 1.2e-06 56.6 36 75.0
Atru.chr1.1378 Acer truncatum HOM05D005318 ORTHO05D006791 1.6e-06 56.2 36 72.2
Haze_20288 Corylus avellana HOM05D005318 ORTHO05D006791 1.6e-06 56.2 43 60.5
Glyma.03G121100 Glycine max HOM05D005318 ORTHO05D006791 1.6e-06 56.2 36 75.0
GSVIVG01025810001 Vitis vinifera HOM05D005318 ORTHO05D006791 1.6e-06 56.2 36 75.0
Ciclev10010989m.g Citrus clementina HOM05D005318 ORTHO05D006791 2.1e-06 55.8 36 72.2
Cc06_g21270 Coffea canephora HOM05D005318 ORTHO05D006791 2.1e-06 55.8 36 72.2
Potri.006G031700 Populus trichocarpa HOM05D005318 ORTHO05D006791 2.7e-06 55.5 36 72.2
Aa31LG3G1260 Aethionema arabicum HOM05D005318 ORTHO05D006791 3.6e-06 55.1 36 72.2
Potri.016G028900 Populus trichocarpa HOM05D005318 ORTHO05D006791 3.6e-06 55.1 36 72.2
QL07p013739 Quercus lobata HOM05D005318 ORTHO05D006791 3.6e-06 55.1 36 72.2
Sabra16G0033000 Salix brachista HOM05D005318 ORTHO05D006791 3.6e-06 55.1 36 72.2
THA.LOC104803226 Tarenaya hassleriana HOM05D005318 ORTHO05D006791 3.6e-06 55.1 34 76.5
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 4.6e-06 54.7 36 75.0
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 4.6e-06 54.7 36 75.0
MELO3C019135.2 Cucumis melo HOM05D005318 ORTHO05D006791 4.6e-06 54.7 36 72.2
Sp4g23170 Schrenkiella parvula HOM05D005318 ORTHO05D006791 4.6e-06 54.7 36 72.2
Thecc.05G118400 Theobroma cacao HOM05D005318 ORTHO05D006791 4.6e-06 54.7 36 72.2
CANSAT64G0498 Cannabis sativa HOM05D005318 ORTHO05D006791 6.1e-06 54.3 49 61.2
Cfa019951 Carpinus fangiana HOM05D005318 ORTHO05D006791 6.1e-06 54.3 36 69.4
Duzib128G1115 Durio zibethinus HOM05D005318 ORTHO05D006791 6.1e-06 54.3 36 72.2
ECA236G3220 Erigeron canadensis HOM05D005318 ORTHO05D006791 6.1e-06 54.3 36 66.7


User provided reference genes

Program Settings