Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 5.6e-178 627.5 313 100.0
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 4.1e-120 435.3 324 71.3
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 5.5e-117 424.9 318 71.1
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.4e-104 383.6 320 65.0
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.0e-103 379.8 312 64.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.9e-101 373.2 311 65.6
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.0e-99 365.5 309 64.1
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.8e-99 364.8 310 64.2
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 1.6e-95 353.6 291 62.9
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 3.5e-95 352.4 319 60.8
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.1e-93 347.4 307 59.0
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.6e-92 343.6 260 66.5
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.6e-92 342.4 301 59.8
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 4.7e-92 342.0 262 65.6
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 6.1e-92 341.7 262 68.7
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 6.1e-92 341.7 282 62.8
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.5e-90 337.0 303 59.1
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.5e-90 337.0 305 57.7
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.0e-90 336.7 259 67.6
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.7e-90 335.1 317 57.7
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.7e-89 333.6 312 57.4
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.7e-89 333.6 262 67.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.8e-89 332.8 262 67.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 4.9e-89 332.0 262 66.8
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.9e-89 332.0 262 66.8
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 4.9e-89 332.0 271 63.1
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 6.3e-89 331.6 266 63.5
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 6.3e-89 331.6 260 65.4
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.1e-88 329.3 262 66.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 4.1e-88 328.9 315 55.9
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 4.1e-88 328.9 260 65.0
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 5.4e-88 328.6 273 65.9
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.4e-88 328.6 309 58.3
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 9.2e-88 327.8 259 64.1
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 9.2e-88 327.8 271 61.6
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.2e-87 327.4 278 62.9
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 5.9e-87 325.1 259 64.5
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 5.9e-87 325.1 262 64.9
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.7e-86 323.6 260 62.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 2.3e-86 323.2 316 54.7
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 6.6e-86 321.6 267 60.7
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 6.6e-86 321.6 269 62.1
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 8.6e-86 321.2 291 58.8
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.6e-85 318.5 260 63.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 5.6e-85 318.5 262 61.1
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.6e-84 317.0 309 55.0
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.1e-84 316.6 260 63.5
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 2.1e-84 316.6 262 61.5
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.8e-84 316.2 284 60.2
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 3.6e-84 315.8 326 54.3
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.4e-83 313.9 291 57.7
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.8e-83 313.5 263 61.6
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.5e-82 310.5 260 60.0
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.5e-82 310.5 262 63.7
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.8e-82 308.5 309 54.0
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.2e-81 306.6 268 59.3
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 2.4e-80 303.1 259 61.4
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 7.0e-80 301.6 264 58.3
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.7e-79 299.7 260 59.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.3e-78 297.4 310 53.2
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 5.0e-78 295.4 268 57.5
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 8.6e-78 294.7 231 62.8
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 1.4e-75 287.3 272 54.8
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.6e-74 283.1 279 56.3
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 9.8e-74 281.2 281 50.2
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.2e-73 280.0 304 51.6
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.9e-72 276.9 307 51.5
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.2e-72 276.2 259 56.0
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 9.2e-72 274.6 316 50.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.1e-71 273.5 316 50.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 6.0e-71 271.9 296 51.7
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.0e-70 269.6 322 48.8
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 6.6e-70 268.5 307 50.8
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 6.6e-70 268.5 307 50.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 8.6e-70 268.1 263 54.4
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.5e-69 266.5 283 51.2
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 5.6e-69 265.4 263 54.0
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.2e-68 264.2 263 52.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 3.1e-67 259.6 307 48.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.1e-67 259.6 259 53.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 6.8e-67 258.5 224 61.2
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.4e-64 248.8 268 51.1
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 9.2e-64 248.1 268 50.7
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.3e-61 238.4 187 65.8
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 4.6e-55 219.2 270 48.1
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 4.6e-55 219.2 280 45.0
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.3e-54 217.6 270 45.9
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 1.5e-53 214.2 268 42.5
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.4e-51 206.8 300 41.3
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.4e-51 206.8 300 41.3
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.2e-48 196.4 219 48.9
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.0e-46 191.4 261 42.5
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 7.1e-40 168.7 249 41.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.4e-35 154.5 183 46.4
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 6.9e-35 152.1 272 37.1
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.0e-34 150.6 133 56.4
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 4.5e-34 149.4 266 38.3
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 5.6e-29 132.5 123 58.5
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 5.7e-21 105.9 94 57.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 9.4e-16 88.6 81 55.6
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 2.3e-14 84.0 80 55.0
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 1.5e-10 71.2 73 52.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 2.5e-08 63.9 266 24.1


User provided reference genes

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