Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 0.0e+00 1091.3 534 100.0
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 7.1e-165 584.7 384 79.2
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 6.0e-148 528.5 544 55.9
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 7.7e-135 485.0 539 52.9
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 3.0e-131 473.0 537 51.6
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 8.8e-131 471.5 582 49.0
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 7.7e-127 458.4 537 49.7
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.6e-124 450.7 554 49.6
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 6.1e-124 448.7 536 50.7
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 3.7e-121 439.5 531 47.8
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 2.4e-120 436.8 578 45.0
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 3.1e-120 436.4 575 45.7
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 3.1e-120 436.4 556 48.0
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 2.0e-119 433.7 548 47.6
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 5.9e-119 432.2 552 47.3
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 1.7e-118 430.6 575 44.3
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 3.8e-118 429.5 574 44.3
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 6.5e-118 428.7 532 47.0
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 8.5e-118 428.3 532 47.6
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 8.5e-118 428.3 578 45.2
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.1e-117 427.9 539 47.5
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 1.4e-117 427.6 576 45.0
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.9e-117 427.2 544 47.1
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 7.2e-117 425.2 583 44.3
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 7.2e-117 425.2 577 45.2
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 9.4e-117 424.9 548 47.6
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 1.2e-116 424.5 537 49.9
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.2e-116 424.5 541 48.1
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 1.6e-116 424.1 536 48.7
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 6.1e-116 422.2 553 47.0
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.4e-115 421.0 544 46.5
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 3.0e-115 419.9 577 43.7
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 6.7e-115 418.7 540 46.3
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 6.7e-115 418.7 530 47.7
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 8.8e-115 418.3 543 47.0
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 2.6e-114 416.8 529 47.1
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 5.7e-114 415.6 346 63.6
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 9.7e-114 414.8 537 46.0
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 2.8e-113 413.3 539 46.6
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 4.8e-113 412.5 543 45.1
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 8.2e-113 411.8 541 45.7
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 4.1e-112 409.5 539 45.8
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 4.1e-112 409.5 540 46.5
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.1e-112 409.5 540 46.5
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 4.1e-112 409.5 535 46.2
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 9.1e-112 408.3 540 46.3
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 9.1e-112 408.3 520 47.7
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 1.2e-111 407.9 486 49.0
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 7.7e-111 405.2 540 45.9
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.0e-110 404.8 566 45.2
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.9e-110 403.3 540 46.5
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 5.0e-110 402.5 545 46.6
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 6.5e-110 402.1 544 44.9
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 3.2e-109 399.8 533 46.2
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 4.7e-108 396.0 539 46.8
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 6.1e-108 395.6 556 43.3
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 1.0e-107 394.8 526 44.5
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 2.3e-107 393.7 520 45.2
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 3.0e-107 393.3 537 43.0
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 4.0e-107 392.9 544 43.8
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.2e-106 391.3 525 45.5
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.6e-106 390.2 565 43.7
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 2.8e-105 386.7 561 43.9
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 2.8e-105 386.7 550 43.1
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 3.1e-104 383.3 564 43.3
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 2.9e-102 376.7 530 40.4
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 1.4e-99 367.9 531 43.7
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 2.3e-99 367.1 495 43.6
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 2.6e-98 363.6 546 43.0
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 4.4e-98 362.8 524 43.9
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 2.8e-97 360.1 564 40.1
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 2.8e-97 360.1 532 43.4
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 3.7e-97 359.8 521 43.8
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.7e-97 359.8 477 43.4
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 1.4e-96 357.8 523 43.8
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 7.0e-96 355.5 542 41.1
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 2.7e-95 353.6 524 44.1
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 5.0e-94 349.4 531 43.3
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 3.6e-92 343.2 530 42.8
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 3.4e-90 336.7 405 50.4
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 4.1e-88 329.7 528 40.9
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 9.2e-88 328.6 527 39.5
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 2.7e-87 327.0 530 40.9
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 5.9e-87 325.9 517 42.9
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 1.7e-86 324.3 530 40.4
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 2.9e-86 323.6 403 49.4
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 5.6e-85 319.3 528 40.0
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 8.0e-84 315.5 398 44.5
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 5.2e-83 312.8 515 40.4
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 3.7e-81 306.6 548 38.1
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 8.3e-73 278.9 533 36.4
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 1.7e-70 271.2 521 37.2
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.3e-70 270.8 347 46.4
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 3.9e-62 243.4 536 34.0
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 5.6e-61 239.6 275 50.5
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 3.6e-60 236.9 303 43.6
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 4.7e-60 236.5 274 48.5
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 2.4e-59 234.2 379 39.6
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 2.4e-56 224.2 282 46.1
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.3e-53 213.8 272 43.4
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 8.1e-52 209.1 296 44.9
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 9.3e-48 195.7 572 29.0
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 1.7e-46 191.4 314 40.4
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.5e-45 188.3 482 30.5
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 3.3e-45 187.2 617 27.9
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 7.3e-45 186.0 191 55.0
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.6e-44 184.9 214 47.7
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.6e-39 168.3 550 26.5
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 6.9e-35 152.9 191 48.2
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.0e-30 139.0 69 95.7
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 2.5e-29 134.4 113 59.3
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 5.0e-25 120.2 245 32.2
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 1.8e-22 111.7 69 75.4
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 7.4e-21 106.3 114 47.4
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-19 102.4 115 44.3
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 2.7e-15 87.8 135 37.0
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 1.1e-13 82.4 55 70.9
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.5e-13 82.0 70 62.9
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 1.4e-11 75.5 109 45.9
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 5.9e-10 70.1 188 29.8
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 1.6e-07 62.0 48 56.2


User provided reference genes

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