Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 5.6e-84 314.3 168 100.0
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 2.8e-35 152.5 179 58.1
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 4.8e-35 151.8 180 55.6
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 2.4e-34 149.4 186 54.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 1.6e-33 146.7 182 53.3
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 5.9e-33 144.8 181 54.1
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 5.9e-33 144.8 185 54.1
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 8.5e-32 141.0 185 54.1
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 7.2e-31 137.9 187 51.3
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 9.4e-31 137.5 184 54.3
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.2e-30 137.1 184 52.7
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 1.2e-30 137.1 189 52.9
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.1e-30 136.3 185 48.6
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 2.7e-30 136.0 183 52.5
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 4.7e-30 135.2 184 53.8
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 8.0e-30 134.4 182 49.5
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 8.0e-30 134.4 180 49.4
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 8.0e-30 134.4 183 54.1
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 4.0e-29 132.1 182 49.5
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 4.0e-29 132.1 183 49.7
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 4.0e-29 132.1 183 49.7
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 8.8e-29 131.0 184 49.5
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 1.2e-28 130.6 186 49.5
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.2e-28 130.6 180 49.4
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 1.2e-28 130.6 187 50.3
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.5e-28 130.2 180 49.4
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.5e-28 130.2 184 52.7
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 9.8e-28 127.5 189 46.6
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 9.8e-28 127.5 187 51.9
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 1.7e-27 126.7 184 47.8
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.2e-27 126.3 182 48.4
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 2.8e-27 125.9 184 50.0
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 4.8e-27 125.2 180 46.1
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 4.8e-27 125.2 180 49.4
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.8e-27 125.2 180 49.4
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 4.8e-27 125.2 190 50.0
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 4.8e-27 125.2 188 46.8
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 6.3e-27 124.8 188 50.0
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.8e-26 123.2 182 47.3
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 1.8e-26 123.2 189 48.1
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 4.1e-26 122.1 190 49.5
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 4.1e-26 122.1 199 47.7
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 5.4e-26 121.7 188 46.3
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 5.4e-26 121.7 182 47.8
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 7.0e-26 121.3 184 48.9
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 9.1e-26 120.9 184 48.4
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 1.2e-25 120.6 187 49.7
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 1.2e-25 120.6 189 46.6
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 2.7e-25 119.4 189 45.5
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 2.7e-25 119.4 183 48.6
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 4.5e-25 118.6 183 47.5
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 4.5e-25 118.6 182 47.3
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 5.9e-25 118.2 189 46.6
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 7.7e-25 117.9 179 48.0
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 7.7e-25 117.9 192 46.4
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 7.7e-25 117.9 179 48.6
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 1.0e-24 117.5 183 43.7
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.0e-24 117.5 184 45.1
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.0e-24 117.5 234 40.2
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.3e-24 117.1 190 45.8
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.3e-24 117.1 192 47.9
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 1.7e-24 116.7 185 46.5
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 1.7e-24 116.7 183 49.7
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.7e-24 116.7 190 46.3
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 2.9e-24 115.9 187 47.1
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 8.5e-24 114.4 190 45.3
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 1.5e-23 113.6 195 43.1
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 2.5e-23 112.8 181 46.4
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 3.2e-23 112.5 192 44.3
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 4.2e-23 112.1 195 42.6
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 4.2e-23 112.1 190 45.8
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 5.5e-23 111.7 190 42.6
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 9.4e-23 110.9 186 46.8
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 1.2e-22 110.5 182 45.6
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 2.7e-22 109.4 188 46.8
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 2.7e-22 109.4 196 42.9
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 1.0e-21 107.5 190 45.3
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 1.0e-21 107.5 185 45.9
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 1.0e-21 107.5 185 45.9
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 1.0e-21 107.5 117 58.1
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 1.0e-21 107.5 183 45.4
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 3.0e-21 105.9 185 43.2
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 6.8e-21 104.8 185 44.3
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 8.8e-21 104.4 187 44.4
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 2.6e-20 102.8 189 42.9
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 3.4e-20 102.4 191 43.5
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 4.4e-20 102.1 190 43.7
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 4.4e-20 102.1 190 43.7
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 4.4e-20 102.1 175 46.3
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 7.5e-20 101.3 190 43.7
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.3e-19 100.5 114 56.1
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 1.7e-19 100.1 200 40.5
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 4.9e-19 98.6 197 39.6
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 8.3e-19 97.8 184 40.8
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 1.4e-18 97.1 187 42.2
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 2.4e-18 96.3 126 51.6
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 3.1e-18 95.9 189 41.3
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 1.3e-16 90.5 169 40.8
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 2.9e-16 89.4 125 47.2
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 8.6e-16 87.8 195 40.5
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 2.5e-15 86.3 200 39.0
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 3.3e-15 85.9 195 35.9
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 9.5e-15 84.3 190 35.8
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 4.7e-14 82.0 195 39.0
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 1.8e-13 80.1 95 53.7
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 3.0e-13 79.3 89 56.2
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 5.2e-13 78.6 52 82.7
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 6.8e-13 78.2 184 37.5
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.5e-12 77.0 90 53.3
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 3.4e-12 75.9 89 55.1
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 5.7e-12 75.1 180 37.8
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 1.7e-11 73.6 170 38.2
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 4.9e-11 72.0 251 31.9
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 6.4e-11 71.6 56 71.4
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 8.3e-11 71.2 90 51.1
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 5.4e-10 68.6 94 47.9
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 7.0e-10 68.2 54 72.2
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.0e-10 68.2 54 72.2
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 7.0e-10 68.2 128 43.8
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.6e-09 67.0 47 83.0
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 4.6e-09 65.5 96 47.9
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 1.0e-08 64.3 100 45.0
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.1e-07 60.8 88 46.6
CAN.G419.11 Capsicum annuum HOM05D005654 ORTHO05D006438 1.9e-07 60.1 40 80.0
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 1.9e-07 60.1 119 42.0
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 3.3e-07 59.3 84 47.6
SHI06070 Sapria himalayana HOM05D005654 ORTHO05D006438 4.3e-07 58.9 88 44.3
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 7.3e-07 58.2 89 47.2
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 9.5e-07 57.8 87 46.0
FAN24G2610 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.6e-06 57.0 43 74.4
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 4.7e-06 55.5 36 69.4
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 8.0e-06 54.7 49 63.3


User provided reference genes

Program Settings