Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 5.7e-247 857.1 413 100.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.2e-197 691.4 414 80.7
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 2.4e-184 649.0 407 75.7
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 6.5e-182 641.0 429 72.5
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 4.2e-181 638.3 396 75.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.1e-177 625.9 399 72.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 8.2e-177 624.0 404 73.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.1e-176 623.6 406 70.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.1e-176 623.6 401 71.8
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.4e-176 623.2 409 72.9
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.4e-176 622.5 402 71.6
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.4e-176 622.5 401 71.6
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 7.6e-175 617.5 402 70.9
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 7.6e-175 617.5 389 74.0
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.9e-173 612.8 350 85.7
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 5.5e-173 611.3 410 69.8
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.0e-171 607.1 391 72.6
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.0e-171 607.1 398 70.9
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 6.3e-169 597.8 414 67.6
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 8.2e-169 597.4 397 70.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.1e-168 597.0 414 68.1
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.4e-168 596.7 405 69.9
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.4e-168 595.9 418 69.1
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.5e-166 587.4 407 66.8
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 8.5e-166 587.4 413 68.0
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 5.5e-165 584.7 392 70.2
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 7.2e-165 584.3 418 67.0
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.2e-164 583.6 411 66.9
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.2e-164 583.6 399 67.7
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.0e-163 580.5 419 66.3
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.8e-163 579.7 401 67.1
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.8e-163 579.7 427 64.9
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.8e-163 579.7 399 67.4
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.8e-163 577.4 399 67.2
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 4.3e-162 575.1 404 65.8
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 5.7e-162 574.7 397 68.5
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.7e-162 573.9 399 66.7
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 4.8e-161 571.6 402 66.7
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 6.3e-161 571.2 399 67.2
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 3.1e-160 568.9 392 66.8
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.1e-160 568.9 417 64.5
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 6.9e-160 567.8 397 67.3
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.2e-159 567.0 400 68.0
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.5e-159 566.6 429 63.2
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.3e-158 563.5 411 64.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.7e-158 563.1 391 68.0
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 2.9e-158 562.4 393 66.9
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 8.5e-158 560.8 418 65.1
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 1.9e-157 559.7 400 65.2
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 5.5e-157 558.1 450 63.1
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 2.1e-156 556.2 397 68.0
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 3.6e-156 555.4 394 67.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 9.7e-154 547.4 408 64.2
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.3e-153 547.0 358 72.3
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 4.8e-153 545.0 391 66.2
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.1e-152 543.9 392 66.8
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 9.1e-152 540.8 390 67.2
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-151 540.4 403 63.0
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 4.5e-151 538.5 382 65.7
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.0e-150 537.3 382 65.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.7e-150 536.6 383 65.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.2e-150 536.2 382 65.2
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.9e-150 535.8 366 68.9
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.5e-150 534.3 392 65.1
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.1e-149 533.9 388 62.1
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.1e-149 533.9 382 64.9
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.5e-149 533.5 404 61.9
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.5e-149 532.7 383 64.2
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.5e-149 532.7 413 63.0
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 3.2e-149 532.3 408 62.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 4.2e-149 531.9 465 56.3
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.7e-148 528.5 391 63.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.0e-146 523.1 421 60.8
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 7.5e-146 521.2 407 61.7
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 4.1e-144 515.4 359 68.2
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 3.5e-143 512.3 384 63.0
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 3.2e-141 505.8 396 60.6
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 2.2e-134 483.0 429 55.5
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.9e-134 482.6 437 55.6
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.6e-132 476.9 391 61.1
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 4.0e-131 472.2 350 64.6
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.4e-128 463.0 350 61.7
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.4e-128 463.0 288 77.4
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 4.3e-125 452.2 359 61.3
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.1e-124 449.9 341 66.0
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.4e-120 436.4 421 54.4
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.8e-115 420.2 362 59.4
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.5e-109 399.8 327 58.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 6.2e-108 395.2 396 51.0
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 4.4e-106 389.0 254 75.2
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.9e-93 347.1 251 68.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 5.2e-91 339.0 383 44.6
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.2e-90 337.8 251 65.3
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 5.8e-90 335.5 424 46.5
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 5.8e-90 335.5 213 71.4
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 2.5e-85 320.1 334 45.5
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 8.1e-84 315.1 400 41.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.2e-82 311.2 375 44.0
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 7.6e-82 308.5 391 44.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.3e-81 307.8 396 45.5
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.0e-78 298.1 402 40.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 8.4e-73 278.5 211 63.5
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.3e-69 266.2 170 72.4
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 4.2e-64 249.6 221 57.5
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 9.0e-59 231.9 212 55.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.7e-57 227.6 183 59.0
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 5.5e-56 222.6 183 57.9
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 2.9e-49 200.3 137 70.1
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 5.5e-48 196.1 296 42.6
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.2e-44 184.1 129 65.9
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 8.2e-44 182.2 303 36.3
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 5.9e-42 176.0 119 66.4
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.0e-38 165.2 97 75.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 7.7e-34 149.1 107 65.4
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 4.5e-26 123.2 157 42.7
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.7e-25 121.3 126 46.0
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.2e-24 117.1 108 58.3
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.5e-16 91.7 86 52.3
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.8e-14 82.4 121 39.7
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 1.1e-08 65.5 42 69.0
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 4.0e-06 57.0 65 44.6


User provided reference genes

Program Settings