Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 0.0e+00 1120.1 548 100.0
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 4.6e-236 821.2 584 73.3
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 5.3e-192 674.9 569 62.4
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.4e-168 597.0 550 58.7
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 2.9e-161 572.8 523 57.2
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.2e-151 540.8 559 53.5
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.6e-151 538.9 588 50.3
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.5e-149 533.9 556 52.5
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.8e-147 526.9 577 50.6
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 1.1e-144 517.7 569 50.4
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.4e-144 517.3 571 50.3
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.4e-144 517.3 571 50.6
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 4.6e-143 512.3 574 49.7
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 1.0e-142 511.1 551 51.0
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.0e-142 509.6 556 51.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 6.6e-142 508.4 558 50.7
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 6.6e-142 508.4 560 51.1
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 8.7e-142 508.1 563 51.5
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.5e-141 507.3 555 50.3
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 5.6e-141 505.4 582 48.6
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 1.6e-140 503.8 567 50.3
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.1e-140 503.4 569 49.6
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.1e-140 503.4 556 50.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.8e-140 503.1 556 50.5
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 6.2e-140 501.9 540 49.4
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.4e-139 500.7 545 49.7
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 4.0e-139 499.2 556 50.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 6.9e-139 498.4 545 49.7
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 6.9e-139 498.4 554 50.2
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 1.5e-138 497.3 565 48.8
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 2.0e-138 496.9 543 49.4
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 3.8e-137 492.7 575 48.7
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.9e-136 490.3 572 49.1
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 7.1e-136 488.4 570 47.9
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 9.3e-136 488.0 562 48.9
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 1.6e-135 487.3 552 51.4
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 6.0e-135 485.3 566 49.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 3.0e-134 483.0 528 50.8
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.1e-134 482.3 576 47.7
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 8.7e-134 481.5 536 46.8
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 9.6e-133 478.0 537 47.1
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.6e-132 477.2 536 46.8
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 1.8e-131 473.8 556 48.6
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 4.0e-131 472.6 581 44.8
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 6.9e-131 471.9 539 47.3
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.5e-130 470.7 556 48.6
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 3.4e-130 469.5 567 46.4
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 5.8e-130 468.8 539 49.9
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 1.3e-129 467.6 573 46.1
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.1e-128 464.5 522 49.6
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.9e-128 463.8 568 44.5
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 1.6e-127 460.7 528 47.3
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.1e-127 460.3 561 49.2
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.0e-126 458.0 523 48.0
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 3.7e-124 449.5 541 45.1
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.7e-124 449.5 556 47.8
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 6.2e-124 448.7 523 46.7
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.2e-124 448.7 594 42.8
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 8.1e-124 448.4 552 46.0
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 2.0e-122 443.7 561 45.1
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 2.0e-122 443.7 507 48.5
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 5.8e-122 442.2 564 44.0
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.2e-121 440.3 435 54.5
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 3.8e-121 439.5 546 45.6
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 6.5e-121 438.7 562 46.6
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.4e-120 437.6 549 46.1
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 5.5e-120 435.6 551 45.0
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 2.7e-119 433.3 600 41.7
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.7e-119 433.3 565 45.5
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 3.5e-119 433.0 523 46.1
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.9e-117 427.2 557 43.3
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 3.4e-114 416.4 550 45.8
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 2.5e-109 400.2 551 44.5
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 3.1e-107 393.3 526 44.3
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 3.1e-107 393.3 526 44.3
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 9.0e-107 391.7 526 43.9
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 3.4e-106 389.8 526 44.1
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.4e-106 389.8 541 44.2
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 7.7e-106 388.7 541 43.3
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.3e-105 387.9 574 40.1
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 5.0e-105 386.0 526 43.5
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 6.5e-105 385.6 526 43.2
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 8.5e-105 385.2 543 43.5
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.4e-104 384.4 538 44.8
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 1.6e-103 380.9 457 45.7
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.1e-103 380.6 544 40.3
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 6.1e-103 379.0 519 42.6
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 5.1e-102 375.9 413 49.6
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 7.7e-98 362.1 373 52.0
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-97 361.3 402 48.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.9e-96 357.5 398 48.0
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 5.5e-96 355.9 583 38.1
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 8.8e-94 348.6 414 44.2
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.1e-93 348.2 480 41.0
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 2.6e-93 347.1 530 40.2
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.6e-90 337.0 445 42.7
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.0e-89 335.1 358 50.3
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.5e-85 321.2 405 46.4
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 5.5e-80 302.8 300 57.0
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 2.3e-70 270.8 245 54.3
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 6.4e-60 236.1 213 60.1
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.4e-59 234.2 186 59.1
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 8.9e-54 215.7 134 73.9
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.5e-53 214.9 610 28.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.9e-51 208.0 446 32.1
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.0e-50 204.5 527 30.0
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.4e-43 181.0 143 62.2
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 2.3e-41 174.5 594 28.1
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.3e-38 164.5 436 26.4
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 3.2e-35 154.1 392 28.1
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 9.3e-27 125.9 390 28.7
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 9.0e-22 109.4 126 48.4
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 7.6e-21 106.3 156 47.4
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 4.8e-15 87.0 74 56.8
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 5.8e-13 80.1 90 40.0
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.0e-09 69.3 75 48.0
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.9e-09 67.4 60 43.3
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 7.4e-08 63.2 81 34.6
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 7.4e-08 63.2 43 69.8


User provided reference genes

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