Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0117400 Rhododendron simsii HOM05D003095 ORTHO05D003517 1.1e-47 193.0 97 100.0
Glyma.06G309100 Glycine max HOM05D003095 ORTHO05D003517 1.1e-10 70.1 92 40.2
Ciclev10029652m.g Citrus clementina HOM05D003095 ORTHO05D003517 6.9e-10 67.4 96 37.5
CSS0033942 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 1.5e-09 66.2 92 42.4
Dinv42060 Davidia involucrata HOM05D003095 ORTHO05D003517 1.5e-09 66.2 86 40.7
Hund03256 Selenicereus undatus HOM05D003095 ORTHO05D003517 1.5e-09 66.2 97 41.2
Atru.chr5.3024 Acer truncatum HOM05D003095 ORTHO05D003517 2.0e-09 65.9 95 37.9
Nn5g29621 Nelumbo nucifera HOM05D003095 ORTHO05D003517 2.6e-09 65.5 90 42.2
TWI31G0443 Tripterygium wilfordii HOM05D003095 ORTHO05D003517 2.6e-09 65.5 98 40.8
Potri.004G155500 Populus trichocarpa HOM05D003095 ORTHO05D003517 4.5e-09 64.7 92 39.1
Prupe.8G064900 Prunus persica HOM05D003095 ORTHO05D003517 4.5e-09 64.7 83 41.0
DCAR_003668 Daucus carota HOM05D003095 ORTHO05D003517 5.9e-09 64.3 90 37.8
Glyma.02G157900 Glycine max HOM05D003095 ORTHO05D003517 5.9e-09 64.3 85 37.6
Lalb_Chr25g0280921 Lupinus albus HOM05D003095 ORTHO05D003517 5.9e-09 64.3 95 35.8
Lj4g0025197 Lotus japonicus HOM05D003095 ORTHO05D003517 1.0e-08 63.5 92 40.2
vmacro17487 Vaccinium macrocarpon HOM05D003095 ORTHO05D003517 1.0e-08 63.5 83 41.0
CSS0000040 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 1.3e-08 63.2 86 38.4
CSS0048455 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 1.3e-08 63.2 86 38.4
Prupe.8G096200 Prunus persica HOM05D003095 ORTHO05D003517 1.3e-08 63.2 92 35.9
Sabra04G0103300 Salix brachista HOM05D003095 ORTHO05D003517 1.3e-08 63.2 93 38.7
Dinv23514 Davidia involucrata HOM05D003095 ORTHO05D003517 1.7e-08 62.8 86 39.5
TWI79G1173 Tripterygium wilfordii HOM05D003095 ORTHO05D003517 1.7e-08 62.8 97 40.2
Eucgr.I01274 Eucalyptus grandis HOM05D003095 ORTHO05D003517 2.2e-08 62.4 85 40.0
Ca_14242_v3 Cicer arietinum L. HOM05D003095 ORTHO05D003517 2.9e-08 62.0 88 33.0
Duzib264G0230 Durio zibethinus HOM05D003095 ORTHO05D003517 5.0e-08 61.2 83 38.6
QL11p043988 Quercus lobata HOM05D003095 ORTHO05D003517 5.0e-08 61.2 91 37.4
CAN.G1412.13 Capsicum annuum HOM05D003095 ORTHO05D003517 6.5e-08 60.8 83 38.6
LjContig00049g0022514 Lotus japonicus HOM05D003095 ORTHO05D003517 6.5e-08 60.8 92 39.1
MBI05_g05282_MAGBIO Magnolia biondii HOM05D003095 ORTHO05D003517 6.5e-08 60.8 90 40.0
PSO700G0195 Papaver somniferum HOM05D003095 ORTHO05D003517 8.5e-08 60.5 94 37.2
QL01p053044 Quercus lobata HOM05D003095 ORTHO05D003517 8.5e-08 60.5 96 35.4
QL01p053074 Quercus lobata HOM05D003095 ORTHO05D003517 8.5e-08 60.5 96 35.4
QL10p007071 Quercus lobata HOM05D003095 ORTHO05D003517 8.5e-08 60.5 96 35.4
PGSC0003DMG400000729 Solanum tuberosum HOM05D003095 ORTHO05D003517 8.5e-08 60.5 83 37.3
GSVIVG01031976001 Vitis vinifera HOM05D003095 ORTHO05D003517 8.5e-08 60.5 95 35.8
Haze_02394 Corylus avellana HOM05D003095 ORTHO05D003517 1.1e-07 60.1 97 37.1
Rhsim11G0048900 Rhododendron simsii HOM05D003095 ORTHO05D003517 1.1e-07 60.1 89 37.1
Sabra02G0046500 Salix brachista HOM05D003095 ORTHO05D003517 1.1e-07 60.1 86 40.7
Actinidia24323 Actinidia chinensis HOM05D003095 ORTHO05D003517 1.4e-07 59.7 92 37.0
AUR62011312 Chenopodium quinoa HOM05D003095 ORTHO05D003517 1.4e-07 59.7 94 37.2
Lsat_1_v5_gn_5_117800 Lactuca sativa HOM05D003095 ORTHO05D003517 1.4e-07 59.7 83 38.6
Nitab4.5_0011729g0020 Nicotiana tabacum HOM05D003095 ORTHO05D003517 1.4e-07 59.7 83 37.3
Aqoxy5G01623 Aquilegia oxysepala HOM05D003095 ORTHO05D003517 1.9e-07 59.3 92 39.1
Sabra05G0156200 Salix brachista HOM05D003095 ORTHO05D003517 1.9e-07 59.3 96 37.5
Solyc01g109680.3 Solanum lycopersicum HOM05D003095 ORTHO05D003517 1.9e-07 59.3 90 37.8
MD10G1075100 Malus domestica HOM05D003095 ORTHO05D003517 2.5e-07 58.9 89 34.8
Sopen01g051870 Solanum pennellii HOM05D003095 ORTHO05D003517 2.5e-07 58.9 90 37.8
Thecc.01G149400 Theobroma cacao HOM05D003095 ORTHO05D003517 2.5e-07 58.9 92 33.7
Cpa.g.sc62.158 Carica papaya HOM05D003095 ORTHO05D003517 3.2e-07 58.5 97 35.1
Manes.17G101700 Manihot esculenta HOM05D003095 ORTHO05D003517 3.2e-07 58.5 92 35.9
Potri.002G057100 Populus trichocarpa HOM05D003095 ORTHO05D003517 3.2e-07 58.5 86 38.4
CAN.G199.70 Capsicum annuum HOM05D003095 ORTHO05D003517 4.2e-07 58.2 82 41.5
Medtr3g013450 Medicago truncatula HOM05D003095 ORTHO05D003517 4.2e-07 58.2 97 33.0
Peaxi162Scf00016g00073 Petunia axillaris HOM05D003095 ORTHO05D003517 4.2e-07 58.2 83 37.3
Phvul.007G250700 Phaseolus vulgaris HOM05D003095 ORTHO05D003517 4.2e-07 58.2 87 33.3
Prupe.7G155100 Prunus persica HOM05D003095 ORTHO05D003517 4.2e-07 58.2 70 34.3
ATR0564G142 Amborella trichopoda HOM05D003095 ORTHO05D003517 5.5e-07 57.8 85 36.5
CANSAT56G0597 Cannabis sativa HOM05D003095 ORTHO05D003517 5.5e-07 57.8 92 35.9
Cfa004991 Carpinus fangiana HOM05D003095 ORTHO05D003517 5.5e-07 57.8 97 36.1
CiPaw.05G085100 Carya illinoinensis HOM05D003095 ORTHO05D003517 5.5e-07 57.8 85 36.5
Migut.N02616 Erythranthe guttata HOM05D003095 ORTHO05D003517 5.5e-07 57.8 83 39.8
Hund06238 Selenicereus undatus HOM05D003095 ORTHO05D003517 5.5e-07 57.8 92 34.8
arahy.Tifrunner.gnm1.ann1.86RK4S Arachis hypogaea HOM05D003095 ORTHO05D003517 7.2e-07 57.4 92 33.7
arahy.Tifrunner.gnm1.ann1.RU14FQ Arachis hypogaea HOM05D003095 ORTHO05D003517 9.3e-07 57.0 90 33.3
Ciclev10023076m.g Citrus clementina HOM05D003095 ORTHO05D003517 9.3e-07 57.0 91 37.4
PSO676G0010 Papaver somniferum HOM05D003095 ORTHO05D003517 9.3e-07 57.0 88 34.1
QL09p041665 Quercus lobata HOM05D003095 ORTHO05D003517 9.3e-07 57.0 95 34.7
Oeu055595.1 Olea europaea HOM05D003095 ORTHO05D003517 1.2e-06 56.6 85 37.6
Ca_09914_v3 Cicer arietinum L. HOM05D003095 ORTHO05D003517 1.6e-06 56.2 88 30.7
Haze_01901 Corylus avellana HOM05D003095 ORTHO05D003517 1.6e-06 56.2 97 34.0
Glyma.04G132300 Glycine max HOM05D003095 ORTHO05D003517 1.6e-06 56.2 92 33.7
Lj2g0002055 Lotus japonicus HOM05D003095 ORTHO05D003517 1.6e-06 56.2 90 32.2
Oeu061208.1 Olea europaea HOM05D003095 ORTHO05D003517 1.6e-06 56.2 75 40.0
PGR042G0984 Punica granatum HOM05D003095 ORTHO05D003517 1.6e-06 56.2 75 40.0
Cc02_g17490 Coffea canephora HOM05D003095 ORTHO05D003517 2.1e-06 55.8 93 35.5
Haze_01902 Corylus avellana HOM05D003095 ORTHO05D003517 2.1e-06 55.8 97 34.0
SalBow6G1740 Salvia bowleyana HOM05D003095 ORTHO05D003517 2.1e-06 55.8 85 36.5
AUR62020660 Chenopodium quinoa HOM05D003095 ORTHO05D003517 2.7e-06 55.5 96 31.2
Nitab4.5_0000308g0180 Nicotiana tabacum HOM05D003095 ORTHO05D003517 2.7e-06 55.5 83 36.1
Nitab4.5_0002503g0080 Nicotiana tabacum HOM05D003095 ORTHO05D003517 2.7e-06 55.5 89 34.8
DCAR_001537 Daucus carota HOM05D003095 ORTHO05D003517 3.6e-06 55.1 86 33.7
RcHm_v2.0_Chr4g0435221 Rosa chinensis HOM05D003095 ORTHO05D003517 3.6e-06 55.1 96 34.4
SalBow3G4023 Salvia bowleyana HOM05D003095 ORTHO05D003517 3.6e-06 55.1 87 36.8
arahy.Tifrunner.gnm1.ann1.7U3W9V Arachis hypogaea HOM05D003095 ORTHO05D003517 4.6e-06 54.7 92 31.5
arahy.Tifrunner.gnm1.ann1.PX0JLD Arachis hypogaea HOM05D003095 ORTHO05D003517 4.6e-06 54.7 92 32.6
EL10Ac2g03674 Beta vulgaris HOM05D003095 ORTHO05D003517 4.6e-06 54.7 92 35.9
Carub.0003s0488 Capsella rubella HOM05D003095 ORTHO05D003517 4.6e-06 54.7 90 31.1
MD15G1261200 Malus domestica HOM05D003095 ORTHO05D003517 4.6e-06 54.7 74 33.8
Nitab4.5_0003811g0120 Nicotiana tabacum HOM05D003095 ORTHO05D003517 4.6e-06 54.7 91 36.3
Oeu055590.1 Olea europaea HOM05D003095 ORTHO05D003517 4.6e-06 54.7 85 36.5
Sc20g0006190 Simmondsia chinensis HOM05D003095 ORTHO05D003517 4.6e-06 54.7 88 36.4
CsaV3_2G014720 Cucumis sativus L. HOM05D003095 ORTHO05D003517 6.1e-06 54.3 97 38.1
Thhalv10021849m.g Eutrema salsugineum HOM05D003095 ORTHO05D003517 6.1e-06 54.3 83 33.7
vmacro00179 Vaccinium macrocarpon HOM05D003095 ORTHO05D003517 6.1e-06 54.3 86 36.0
CDE01G0538 Ceratophyllum demersum HOM05D003095 ORTHO05D003517 7.9e-06 53.9 67 40.3
ECA234G3955 Erigeron canadensis HOM05D003095 ORTHO05D003517 7.9e-06 53.9 91 34.1
FAN24G2144 Fragaria x ananassa HOM05D003095 ORTHO05D003517 7.9e-06 53.9 98 35.7
Lalb_Chr16g0377821 Lupinus albus HOM05D003095 ORTHO05D003517 7.9e-06 53.9 74 37.8
Zm00001eb055770 Zea mays HOM05D003095 ORTHO05D003517 7.9e-06 53.9 81 37.0


User provided reference genes

Program Settings