Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 4.5e-62 241.1 126 100.0
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 9.9e-33 143.7 87 87.4
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 8.4e-32 140.6 91 80.2
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 8.4e-32 140.6 91 80.2
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.4e-32 140.6 91 82.4
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 1.9e-31 139.4 89 84.3
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.4e-31 139.0 87 80.5
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.4e-31 139.0 91 81.3
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 2.4e-31 139.0 91 78.0
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.4e-31 139.0 86 86.0
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 3.2e-31 138.7 91 78.0
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 3.2e-31 138.7 91 79.1
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 4.1e-31 138.3 91 80.2
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 7.1e-31 137.5 91 81.3
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 9.2e-31 137.1 91 79.1
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 9.2e-31 137.1 91 79.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 9.2e-31 137.1 98 74.5
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 9.2e-31 137.1 91 80.2
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 2.1e-30 136.0 91 78.0
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.6e-30 134.8 87 79.3
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 4.6e-30 134.8 93 77.4
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 7.8e-30 134.0 87 79.3
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 7.8e-30 134.0 94 76.6
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 7.8e-30 134.0 92 79.3
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 7.8e-30 134.0 92 79.3
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 1.0e-29 133.7 92 78.3
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 1.0e-29 133.7 92 78.3
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.0e-29 133.7 91 76.9
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 1.3e-29 133.3 87 79.3
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 1.3e-29 133.3 92 78.3
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 2.3e-29 132.5 87 77.0
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 3.0e-29 132.1 88 80.7
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 3.9e-29 131.7 94 73.4
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 5.1e-29 131.3 91 74.7
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 6.6e-29 131.0 84 78.6
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 6.6e-29 131.0 98 71.4
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 8.6e-29 130.6 88 79.5
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 8.6e-29 130.6 91 73.6
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 1.1e-28 130.2 98 73.5
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.5e-28 129.8 87 77.0
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.9e-28 129.4 86 75.6
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.9e-28 129.4 80 80.0
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.5e-28 129.0 84 79.8
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 3.3e-28 128.6 87 74.7
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 4.3e-28 128.3 90 75.6
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 5.6e-28 127.9 86 75.6
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 7.3e-28 127.5 91 71.4
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 9.6e-28 127.1 91 73.6
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 2.1e-27 125.9 86 75.6
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 2.8e-27 125.6 89 74.2
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 6.2e-27 124.4 86 75.6
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 8.1e-27 124.0 77 81.8
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 1.4e-26 123.2 80 80.0
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.8e-26 122.9 84 73.8
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.8e-26 122.9 84 73.8
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 2.4e-26 122.5 86 74.4
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 4.0e-26 121.7 86 75.6
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 5.2e-26 121.3 81 77.8
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 6.8e-26 120.9 86 73.3
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 6.8e-26 120.9 97 68.0
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 8.9e-26 120.6 84 73.8
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 8.9e-26 120.6 86 73.3
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 8.9e-26 120.6 79 78.5
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.2e-25 120.2 80 78.8
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.2e-25 120.2 86 74.4
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.2e-25 120.2 80 73.8
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 1.2e-25 120.2 84 73.8
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.5e-25 119.8 81 76.5
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 2.6e-25 119.0 84 72.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 2.6e-25 119.0 86 74.4
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 2.6e-25 119.0 78 76.9
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 3.4e-25 118.6 91 70.3
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 5.8e-25 117.9 91 69.2
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.3e-24 116.7 91 72.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.7e-24 116.3 91 71.4
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.7e-24 116.3 87 69.0
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 1.7e-24 116.3 86 72.1
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 2.2e-24 115.9 84 73.8
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 2.2e-24 115.9 87 73.6
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 2.9e-24 115.5 91 70.3
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 4.9e-24 114.8 87 67.8
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 6.4e-24 114.4 91 69.2
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.4e-24 114.4 75 78.7
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 8.4e-24 114.0 84 73.8
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 8.4e-24 114.0 84 73.8
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 8.4e-24 114.0 84 72.6
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.4e-23 112.5 91 70.3
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 3.2e-23 112.1 74 75.7
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 5.4e-23 111.3 79 68.4
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 7.1e-23 110.9 86 70.9
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 1.2e-22 110.2 85 72.9
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 1.2e-22 110.2 85 72.9
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.2e-22 110.2 91 68.1
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 1.6e-22 109.8 85 71.8
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 2.1e-22 109.4 87 70.1
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 2.7e-22 109.0 85 71.8
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 2.7e-22 109.0 69 81.2
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 7.8e-22 107.5 86 61.6
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 7.8e-22 107.5 76 72.4
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 7.8e-22 107.5 69 84.1
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 7.8e-22 107.5 72 77.8
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 1.0e-21 107.1 76 71.1
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 1.3e-19 100.1 77 67.5
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 1.2e-17 93.6 80 62.5
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-17 92.8 83 63.9
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 3.4e-17 92.0 76 60.5
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-16 90.1 63 68.3
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 5.4e-15 84.7 66 69.7
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 2.7e-14 82.4 72 58.3
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 2.4e-07 59.3 81 39.5
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 3.2e-07 58.9 39 71.8


User provided reference genes

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