Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.5e-58 228.0 112 100.0
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.7e-32 140.2 76 89.5
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.7e-23 111.7 64 85.9
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.2e-21 106.7 76 65.8
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 3.8e-20 101.7 76 61.8
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.5e-20 100.9 76 61.8
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 1.1e-19 100.1 74 63.5
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.2e-19 98.2 76 61.8
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.2e-19 97.4 76 60.5
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.4e-19 97.1 69 63.8
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.7e-18 95.5 76 57.9
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.7e-18 94.7 76 59.2
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 55.3
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 55.3
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 55.3
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 57.9
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 57.9
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 57.9
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-17 93.6 76 57.9
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-17 92.8 75 56.0
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-17 92.8 76 55.3
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-17 92.8 76 55.3
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.3e-17 92.4 77 55.8
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-17 92.0 76 55.3
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 8.8e-17 90.5 76 53.9
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.8e-17 90.5 67 67.2
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-16 89.7 74 56.8
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-16 89.7 75 54.7
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 2.0e-16 89.4 76 56.6
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-16 88.6 76 59.2
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 4.4e-16 88.2 76 51.3
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 4.4e-16 88.2 76 51.3
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 4.4e-16 88.2 76 51.3
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 5.7e-16 87.8 76 51.3
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 5.7e-16 87.8 76 51.3
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 9.7e-16 87.0 76 53.9
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 9.7e-16 87.0 76 51.3
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-15 86.7 76 52.6
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-15 86.3 74 54.1
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 8.2e-15 84.0 73 57.5
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 8.2e-15 84.0 76 52.6
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-14 83.2 76 51.3
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 1.8e-14 82.8 68 55.9
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-14 82.4 76 50.0
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 5.3e-14 81.3 72 56.9
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-14 81.3 75 45.3
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-14 81.3 77 55.8
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 7.0e-14 80.9 75 50.7
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 7.0e-14 80.9 76 55.3
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 9.1e-14 80.5 66 54.5
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-13 80.1 77 51.9
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-13 79.7 75 44.0
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-13 78.6 76 48.7
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.5e-13 78.6 76 46.1
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 3.5e-13 78.6 76 48.7
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.5e-13 78.6 62 61.3
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 3.5e-13 78.6 76 50.0
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.5e-13 78.6 73 52.1
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.5e-13 78.2 77 53.2
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 4.5e-13 78.2 69 50.7
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-12 77.0 76 47.4
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-12 76.6 76 46.1
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-12 76.6 76 47.4
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-12 76.6 77 53.2
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-12 76.6 75 44.0
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.7e-12 76.3 63 60.3
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-12 76.3 63 55.6
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-12 75.9 76 46.1
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-12 75.9 76 46.1
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-12 75.9 76 46.1
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 2.9e-12 75.5 63 60.3
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-12 75.1 76 46.1
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-12 75.1 76 44.7
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.0e-12 74.7 74 51.4
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 6.5e-12 74.3 76 43.4
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.5e-12 74.3 68 50.0
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-12 73.9 76 44.7
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 8.5e-12 73.9 76 43.4
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 8.5e-12 73.9 74 47.3
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-11 73.6 75 44.0
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-11 73.6 76 44.7
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 1.5e-11 73.2 72 48.6
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-11 72.8 72 50.0
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-11 72.4 72 50.0
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-11 72.4 76 43.4
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-11 72.4 76 42.1
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-11 72.4 76 42.1
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-11 72.4 72 47.2
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-11 72.4 75 45.3
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-11 72.0 76 42.1
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-11 72.0 76 42.1
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.2e-11 71.6 76 43.4
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-10 70.1 76 42.1
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-10 70.1 73 52.1
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-10 70.1 90 38.9
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-10 69.7 63 47.6
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-10 69.7 76 42.1
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-10 69.7 76 42.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-10 69.3 62 51.6
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-10 69.3 73 43.8
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-10 69.3 73 43.8
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.1e-10 69.3 73 43.8
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.1e-10 69.3 53 62.3
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-10 68.9 62 51.6
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.7e-10 68.9 73 50.7
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.7e-10 68.9 73 52.1
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.6e-10 68.6 76 42.1
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-10 68.6 74 43.2
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-10 68.2 76 39.5
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-10 68.2 75 48.0
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-10 67.8 76 39.5
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-10 67.8 76 39.5
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-10 67.8 63 46.0
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-10 67.8 76 39.5
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.1e-10 67.8 76 42.1
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-10 67.8 74 43.2
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-10 67.4 76 39.5
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-10 67.4 76 39.5
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-10 67.4 76 39.5
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 8.0e-10 67.4 74 43.2
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 8.0e-10 67.4 74 43.2
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-09 67.0 76 39.5
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 2.3e-09 65.9 77 44.2
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-09 65.5 74 41.9
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.0e-09 65.1 76 42.1
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-09 65.1 74 43.2
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 8.8e-09 63.9 70 40.0
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-08 63.5 62 48.4
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-08 63.5 76 36.8
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.4e-08 62.0 76 38.2
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-06 57.0 52 51.9
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-06 56.6 52 50.0
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.8e-06 56.2 76 40.8
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 2.4e-06 55.8 77 41.6
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.1e-06 55.5 52 48.1
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 9.1e-06 53.9 53 43.4
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.1e-06 53.9 42 64.3


User provided reference genes

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