Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 7.0e-116 420.6 212 100.0
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 1.7e-77 293.1 276 59.8
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-70 270.0 242 62.0
Rhsim01G0206100 Rhododendron simsii HOM05D007209 ORTHO05D000921 3.0e-58 229.2 197 66.0
Rhsim11G0031900 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.6e-43 180.3 116 76.7
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 2.3e-42 176.4 175 62.9
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 3.3e-41 172.6 98 89.8
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 4.4e-41 172.2 98 90.8
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.5e-30 136.0 293 31.7
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 2.9e-29 132.9 98 71.4
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 5.2e-26 122.1 210 35.7
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-21 106.7 275 28.0
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.2e-21 106.7 297 27.6
vmacro19172 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 2.2e-21 106.7 90 64.4
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-20 104.4 273 28.2
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.2e-20 102.4 292 27.4
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 4.7e-19 99.0 217 30.9
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 3.0e-18 96.3 279 28.3
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 4.0e-18 95.9 285 25.6
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 4.0e-18 95.9 285 25.6
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 6.8e-18 95.1 190 34.7
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.8e-18 95.1 272 27.2
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.6e-17 93.2 238 29.0
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 2.6e-17 93.2 118 42.4
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 3.4e-17 92.8 211 31.3
RhsimUnG0122200 Rhododendron simsii HOM05D000153 ORTHO05D000921 1.7e-16 90.5 119 39.5
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-16 90.1 183 33.3
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 2.8e-16 89.7 118 40.7
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 8.3e-16 88.2 207 30.0
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 8.3e-16 88.2 278 28.1
Rhsim05G0204000 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.1e-15 87.8 119 38.7
Rhsim12G0033100 Rhododendron simsii HOM05D007209 ORTHO05D000921 1.1e-15 87.8 119 38.7
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.4e-15 86.7 284 27.1
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 2.4e-15 86.7 266 27.4
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.0e-15 85.1 237 28.3
vmacro19171 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 4.5e-14 82.4 85 55.3
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-13 80.1 105 41.9
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 3.8e-13 79.3 105 41.0
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.8e-13 79.3 211 28.0
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.6e-13 78.6 138 33.3
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.9e-12 77.0 115 37.4
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 7.3e-12 75.1 102 34.3
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 7.3e-12 75.1 146 35.6
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 7.3e-12 75.1 103 39.8
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 7.3e-12 75.1 117 40.2
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 1.2e-11 74.3 202 25.2
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.1e-11 73.6 146 33.6
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 3.6e-11 72.8 102 34.3
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 6.1e-11 72.0 118 41.5
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 8.0e-11 71.6 263 28.9
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.0e-10 71.2 230 26.5
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 1.0e-10 71.2 208 26.9
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.0e-10 71.2 263 27.8
CANSAT01G1814 Cannabis sativa HOM05D007209 ORTHO05D000921 1.4e-10 70.9 106 38.7
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.4e-10 70.9 118 36.4
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 1.4e-10 70.9 181 32.0
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-10 70.1 102 32.4
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 8.9e-10 68.2 260 25.0
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.2e-09 67.8 117 35.0
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-09 67.4 226 24.8
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 2.0e-09 67.0 79 34.2
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 2.0e-09 67.0 92 42.4
CANSAT11G2265 Cannabis sativa HOM05D007209 ORTHO05D000921 2.6e-09 66.6 96 40.6
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.6e-09 66.6 229 23.1
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.4e-09 66.2 114 36.8
CANSAT21G0095 Cannabis sativa HOM05D007209 ORTHO05D000921 4.4e-09 65.9 124 34.7
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 5.7e-09 65.5 116 31.9
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 5.7e-09 65.5 92 42.4
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 7.5e-09 65.1 116 32.8
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 7.5e-09 65.1 116 32.8
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.8e-09 64.7 106 36.8
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.7e-08 63.9 92 39.1
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 2.2e-08 63.5 116 31.0
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-08 63.5 83 36.1
TWI75G0168 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.7e-08 62.8 107 31.8
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 6.4e-08 62.0 116 30.2
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.4e-08 62.0 91 39.6
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-07 61.2 90 40.0
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-07 61.2 116 34.5
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 1.8e-07 60.5 124 30.6
Atru.chr5.1075 Acer truncatum HOM05D000665 ORTHO05D000140 2.4e-07 60.1 151 26.5
CSS0042299 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 4.1e-07 59.3 90 37.8
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 4.1e-07 59.3 227 26.4
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 5.4e-07 58.9 86 38.4
EL10Ac6g14409 Beta vulgaris HOM05D007209 ORTHO05D000921 9.2e-07 58.2 121 28.1
Nn5g29893 Nelumbo nucifera HOM05D000665 ORTHO05D000140 1.2e-06 57.8 108 31.5
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-06 57.8 127 31.5
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 1.2e-06 57.8 180 27.2
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.6e-06 57.4 79 40.5
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 2.0e-06 57.0 104 35.6
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 2.0e-06 57.0 108 35.2
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 2.0e-06 57.0 108 35.2
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.7e-06 56.6 96 35.4
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 4.6e-06 55.8 80 41.2
Ciclev10019662m.g Citrus clementina HOM05D000665 ORTHO05D000140 5.9e-06 55.5 111 26.1
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.9e-06 55.5 103 33.0
PSO782G1930 Papaver somniferum HOM05D000665 ORTHO05D000140 5.9e-06 55.5 125 29.6
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 5.9e-06 55.5 105 32.4
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 5.9e-06 55.5 105 32.4
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 5.9e-06 55.5 102 30.4
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.8e-06 55.1 103 31.1
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.8e-06 55.1 224 27.7


User provided reference genes

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