Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 0.0e+00 1818.5 938 100.0
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 0.0e+00 1122.1 1000 65.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 4.9e-294 1014.6 943 63.1
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.1e-293 1013.4 938 62.8
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 3.2e-269 932.2 940 59.4
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.4e-264 916.0 940 57.6
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 3.5e-260 902.1 952 57.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 9.0e-256 887.5 941 55.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.0e-255 886.3 943 55.6
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.4e-253 880.2 948 55.3
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 3.0e-251 872.5 943 56.2
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-247 860.5 954 54.8
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 3.4e-247 859.0 954 55.3
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.4e-247 859.0 940 55.2
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 4.5e-247 858.6 941 54.1
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 7.6e-247 857.8 939 53.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 8.4e-246 854.4 939 53.1
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.5e-245 852.8 949 54.9
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 9.3e-245 850.9 935 53.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.6e-244 850.1 935 53.6
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.1e-244 849.7 954 53.7
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.3e-243 847.0 939 53.0
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.3e-243 847.0 938 53.8
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.0e-243 845.9 939 53.4
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 5.1e-243 845.1 947 54.7
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.5e-242 842.8 938 53.5
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 4.3e-242 842.0 936 54.4
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.7e-242 841.6 941 52.8
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 7.4e-242 841.3 948 53.1
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 6.3e-241 838.2 945 55.2
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.4e-240 837.0 940 52.9
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.4e-240 836.3 949 53.7
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.2e-239 833.9 951 53.8
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.4e-239 832.4 939 54.6
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 3.4e-239 832.4 940 52.6
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 4.5e-239 832.0 938 53.1
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.0e-238 830.9 939 54.5
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.9e-238 829.3 939 54.4
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 3.8e-238 828.9 953 53.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 8.5e-238 827.8 939 54.5
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 1.1e-237 827.4 939 52.1
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.9e-237 826.6 939 54.4
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.3e-235 820.5 939 52.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.5e-231 807.0 946 52.7
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.9e-229 800.0 947 51.3
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 5.5e-229 798.5 939 51.4
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.2e-228 797.3 947 52.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.4e-227 793.9 944 51.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 7.4e-226 788.1 941 52.1
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 4.8e-225 785.4 954 51.2
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.4e-224 783.9 956 50.8
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.4e-224 783.1 941 50.9
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.2e-223 780.8 940 51.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 2.9e-222 776.2 939 50.4
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 5.0e-222 775.4 939 51.1
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.6e-220 770.4 942 49.3
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 2.1e-220 770.0 939 50.5
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 5.2e-219 765.4 942 49.2
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.7e-219 765.0 938 49.7
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.7e-219 765.0 944 49.7
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 3.3e-218 762.7 939 49.9
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.7e-218 761.9 857 53.7
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.7e-217 759.2 941 50.5
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 2.0e-215 753.4 947 50.2
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 2.0e-215 753.4 947 49.7
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.0e-214 751.1 943 49.9
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.3e-214 750.7 939 49.2
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.7e-214 750.4 948 49.6
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.9e-214 749.6 941 50.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 7.2e-213 745.0 929 50.1
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.2e-212 744.2 946 48.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 8.8e-211 738.0 955 48.8
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.7e-209 733.8 936 50.0
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 3.7e-209 732.6 950 48.5
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.6e-207 727.2 935 49.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.0e-206 724.5 949 48.4
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.9e-206 723.0 609 67.7
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.5e-202 710.7 950 48.2
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.7e-201 706.1 815 53.4
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.1e-200 702.6 946 46.7
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.5e-197 694.1 946 47.7
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.7e-193 680.6 951 44.8
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.0e-191 673.7 996 44.6
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.3e-190 671.0 947 44.7
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.9e-190 669.8 950 45.7
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.1e-189 667.9 954 45.0
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 2.8e-188 663.3 957 46.6
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 5.4e-184 649.0 954 44.5
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 9.2e-184 648.3 763 51.5
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 8.6e-182 641.7 749 52.5
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.9e-181 640.6 950 43.6
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 5.6e-181 639.0 950 43.9
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.2e-180 637.9 950 43.5
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.4e-179 634.4 951 43.8
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 5.8e-178 629.0 951 43.7
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 7.5e-178 628.6 974 42.6
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 3.7e-177 626.3 953 43.1
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.0e-174 618.2 626 58.0
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.7e-174 617.5 847 46.2
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.4e-171 607.8 953 42.4
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.4e-170 603.2 842 45.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 4.0e-163 579.7 730 47.9
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 6.0e-159 565.8 938 41.4
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.7e-145 521.2 551 55.7
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 9.9e-138 495.4 820 40.7
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.0e-109 401.4 984 32.5
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.0e-102 379.0 1022 30.9
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 4.1e-99 367.1 642 42.1
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 9.1e-99 365.9 305 64.9
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.0e-94 352.4 293 62.8
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.6e-87 328.6 319 60.2
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.2e-85 322.4 940 29.3
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.1e-71 275.0 429 42.0
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.1e-70 271.2 643 34.5
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 8.3e-68 263.1 291 50.9
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 4.4e-61 240.7 192 67.2
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 6.8e-54 216.9 561 34.4
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.6e-47 194.5 155 70.3
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.0e-41 176.4 181 54.7
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 4.7e-39 167.5 126 76.2
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 8.1e-39 166.8 133 70.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 2.4e-38 165.2 97 83.5
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-36 159.5 374 32.4
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-34 151.4 107 74.8
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 7.8e-34 150.2 126 65.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 6.4e-28 130.6 146 55.5
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 7.1e-27 127.1 156 53.2
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.4e-22 112.1 111 55.0
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 1.3e-09 69.7 139 37.4
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 6.3e-07 60.8 121 40.5
Rhsim02G0185300 Rhododendron simsii HOM05D002097 ORTHO05D002248 4.1e-06 58.2 101 39.6


User provided reference genes

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