Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 3.9e-176 621.3 307 100.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 5.7e-159 564.3 370 78.9
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.2e-158 562.4 307 88.9
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.6e-156 556.2 307 88.6
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 3.5e-156 555.1 307 87.0
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-155 552.7 307 87.9
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 8.5e-155 550.4 307 86.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 2.8e-150 535.4 307 84.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.7e-150 535.0 307 83.1
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 8.3e-150 533.9 307 84.0
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.1e-149 533.5 307 84.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.8e-149 532.7 307 82.4
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 3.1e-149 531.9 307 83.7
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 5.4e-149 531.2 307 83.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 5.4e-149 531.2 307 83.7
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 7.0e-149 530.8 307 83.4
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.2e-148 530.0 307 83.7
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 83.4
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 83.4
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 81.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 3.5e-148 528.5 307 83.4
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 3.5e-148 528.5 307 83.7
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 81.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 5.9e-148 527.7 307 82.7
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.9e-147 525.4 307 81.1
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 3.8e-147 525.0 307 82.7
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 82.4
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 83.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 82.7
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 82.7
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 83.1
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 4.7e-145 518.1 307 81.4
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.4e-144 516.5 307 82.7
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 82.4
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 81.1
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 5.2e-144 514.6 307 80.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 5.2e-144 514.6 307 78.8
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 6.8e-144 514.2 307 81.1
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 79.2
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 80.8
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 80.8
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 7.5e-143 510.8 358 71.8
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 80.5
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 8.3e-142 507.3 307 78.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 78.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 1.1e-141 506.9 304 79.3
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 79.2
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.4e-141 506.5 307 80.1
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 81.1
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 80.1
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 5.4e-141 504.6 307 77.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.6e-140 503.1 307 77.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.0e-140 502.7 307 79.5
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 3.5e-140 501.9 307 77.5
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 4.5e-140 501.5 307 79.8
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 78.8
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.3e-139 500.0 307 79.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 79.5
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 6.6e-139 497.7 288 83.7
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.5e-138 493.8 323 75.9
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.2e-137 493.4 391 65.2
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.0e-135 486.1 371 66.0
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.6e-135 485.7 307 74.3
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 3.4e-135 485.3 307 75.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 7.5e-135 484.2 307 75.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.1e-133 480.3 307 75.2
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.1e-133 480.3 307 73.6
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.3e-131 472.6 307 72.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 8.6e-131 470.7 306 73.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 8.6e-131 470.7 306 71.9
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.9e-126 455.7 285 79.6
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 2.7e-124 449.1 307 72.3
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.7e-123 446.4 307 71.7
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.0e-123 444.9 277 78.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 6.6e-123 444.5 277 76.9
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.5e-122 442.6 293 76.8
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.3e-122 441.8 276 78.6
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 4.7e-121 438.3 278 74.8
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 1.8e-120 436.4 293 73.7
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 8.9e-120 434.1 277 74.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.4e-112 410.2 235 84.7
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 2.6e-111 406.0 243 81.5
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 4.4e-111 405.2 312 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.7e-110 402.1 310 63.2
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 6.4e-110 401.4 307 67.1
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 7.6e-103 377.9 306 59.2
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 3.2e-101 372.5 297 61.3
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 9.6e-98 360.9 236 74.6
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.0e-78 297.7 245 64.1
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.9e-78 296.2 316 49.4
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 5.3e-72 275.4 190 65.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 4.6e-60 235.7 311 43.4
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 6.7e-59 231.9 170 73.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.0e-58 230.3 148 75.0
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.0e-55 220.3 131 78.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 5.9e-55 218.8 565 29.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.1e-53 214.5 282 43.3
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.0e-22 111.7 221 33.5
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.7e-22 110.9 88 68.2
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 5.0e-22 109.4 71 70.4
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 5.6e-21 105.9 96 51.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.5e-18 97.8 126 48.4
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 8.3e-09 65.5 34 91.2
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 1.3e-06 58.2 58 51.7


User provided reference genes

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