Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0091900 Rhododendron simsii HOM05D008250 ORTHO05D010361 5.8e-52 207.2 101 100.0
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 1.0e-11 73.6 99 45.5
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 2.2e-11 72.4 99 44.4
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 2.2e-11 72.4 99 44.4
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 2.9e-11 72.0 101 43.6
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 2.9e-11 72.0 101 43.6
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 6.5e-11 70.9 101 42.6
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 6.5e-11 70.9 101 45.5
Lsat_1_v5_gn_4_159680 Lactuca sativa HOM05D008250 ORTHO05D010361 2.5e-10 68.9 101 39.6
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 5.5e-10 67.8 100 42.0
Haze_15258 Corylus avellana HOM05D008250 ORTHO05D010361 5.5e-10 67.8 109 42.2
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 7.2e-10 67.4 101 41.6
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 9.4e-10 67.0 104 42.3
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.2e-09 66.6 101 40.6
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.6e-09 66.2 101 39.6
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 1.6e-09 66.2 101 39.6
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 1.6e-09 66.2 99 41.4
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 2.7e-09 65.5 98 40.8
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 2.7e-09 65.5 98 40.8
HanXRQChr09g0255361 Helianthus annuus HOM05D008250 ORTHO05D010361 8.0e-09 63.9 100 38.0
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 1.4e-08 63.2 98 41.8
CSS0002791 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 1.8e-08 62.8 38 73.7
CSS0014718 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 1.8e-08 62.8 38 73.7
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 1.8e-08 62.8 96 40.6
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 2.3e-08 62.4 96 40.6
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 3.0e-08 62.0 99 38.4
SGA_v2.0_scaffold15G07489 Striga asiatica HOM05D008250 ORTHO05D010361 3.0e-08 62.0 35 77.1
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 3.0e-08 62.0 101 38.6
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 4.0e-08 61.6 37 73.0
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 4.0e-08 61.6 98 40.8
CiPaw.01G002500 Carya illinoinensis HOM05D008250 ORTHO05D010361 5.2e-08 61.2 102 41.2
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 8.8e-08 60.5 100 38.0
Prupe.6G217600 Prunus persica HOM05D008250 ORTHO05D010361 1.1e-07 60.1 101 38.6
Lalb_Chr05g0230301 Lupinus albus HOM05D008250 ORTHO05D010361 2.0e-07 59.3 104 40.4
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 3.3e-07 58.5 109 37.6
Aa31LG1G16230 Aethionema arabicum HOM05D008250 ORTHO05D010361 4.4e-07 58.2 34 73.5
CsaV3_2G016360 Cucumis sativus L. HOM05D008250 ORTHO05D010361 5.7e-07 57.8 30 83.3
AT5G65880 Arabidopsis thaliana HOM05D008250 ORTHO05D010361 7.5e-07 57.4 109 35.8
Thhalv10005252m.g Eutrema salsugineum HOM05D008250 ORTHO05D010361 9.7e-07 57.0 94 38.3
Glyma.17G159100 Glycine max HOM05D008250 ORTHO05D010361 9.7e-07 57.0 103 38.8
Glyma.05G107700 Glycine max HOM05D008250 ORTHO05D010361 2.8e-06 55.5 84 40.5
Medtr4g097410 Medicago truncatula HOM05D008250 ORTHO05D010361 3.7e-06 55.1 106 35.8
Carub.0008s2677 Capsella rubella HOM05D008250 ORTHO05D010361 4.8e-06 54.7 107 33.6
CDE02G1785 Ceratophyllum demersum HOM05D008250 ORTHO05D010361 6.3e-06 54.3 35 71.4
DCAR_021460 Daucus carota HOM05D008250 ORTHO05D010361 8.2e-06 53.9 39 59.0


User provided reference genes

Program Settings