Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0091100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-117 425.6 216 100.0
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-42 177.2 169 56.2
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-34 150.6 218 43.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.0e-34 147.9 85 76.5
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-27 126.3 59 89.8
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.6e-27 125.9 85 58.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-26 122.1 85 57.6
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-26 122.1 85 57.6
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.5e-25 119.0 85 57.6
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.6e-25 118.2 83 57.8
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.3e-24 117.5 99 51.5
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.3e-24 117.5 99 51.5
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.4e-23 113.2 85 58.8
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 7.1e-23 111.7 85 54.1
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.8e-21 107.1 83 51.8
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.1e-20 104.4 83 51.8
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.8e-18 97.1 68 55.9
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-17 92.8 70 57.1
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-16 91.3 83 49.4
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.9e-16 89.7 83 47.0
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 2.9e-16 89.7 83 47.0
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 3.8e-16 89.4 81 45.7
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 8.4e-16 88.2 84 50.0
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.5e-15 85.5 83 44.6
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.6e-14 84.0 64 48.4
Rhsim09G0077300 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.9e-14 81.6 52 82.7
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-13 80.1 85 40.0
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.7e-13 78.6 102 35.3
Rhsim12G0049400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-12 76.6 85 38.8
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.3e-12 76.3 76 42.1
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 5.7e-12 75.5 73 41.1
Rhsim08G0178600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.1e-10 69.3 85 43.5
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-10 68.9 85 36.5
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 7.6e-09 65.1 78 38.5
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.3e-08 64.3 78 38.5
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.3e-08 64.3 78 38.5
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 3.8e-08 62.8 84 34.5
Phvul.008G116900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-07 61.2 88 34.1
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.1e-07 61.2 54 44.4
EL10Ac7g17991 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-07 60.8 93 28.0
Manes.02G191950 Manihot esculenta HOM05D009258 ORTHO05D009356 4.2e-07 59.3 83 33.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.5e-07 58.9 68 38.2
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.5e-07 58.9 69 34.8
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 5.5e-07 58.9 68 35.3
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 7.2e-07 58.5 78 34.6
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-06 57.8 69 33.3
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-06 57.8 69 31.9
Rhsim02G0131300 Rhododendron simsii HOM05D029833 ORTHO05D009356 1.2e-06 57.8 145 29.7
Lj2g0018214 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-06 57.4 66 36.4
Psat4g086840 Pisum sativum HOM05D007807 ORTHO05D001516 2.7e-06 56.6 70 32.9
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-06 56.2 87 29.9
Lj6g0023930 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-06 56.2 86 31.4
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-06 56.2 69 31.9
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-06 56.2 69 33.3
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-06 56.2 69 33.3
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-06 56.2 69 33.3
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.6e-06 56.2 69 30.4
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 4.6e-06 55.8 69 29.0
Phvul.011G184000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.6e-06 55.8 76 32.9
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.6e-06 55.8 64 37.5
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 6.1e-06 55.5 64 34.4
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.1e-06 55.5 76 32.9
Actinidia37647 Actinidia chinensis HOM05D008219 ORTHO05D009356 7.9e-06 55.1 32 62.5
Phvul.007G174850 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.9e-06 55.1 86 27.9
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.9e-06 55.1 69 31.9


User provided reference genes

Program Settings