Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 7.3e-104 380.6 193 100.0
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 7.7e-77 290.8 193 81.9
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.0e-76 290.4 191 77.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.7e-74 282.3 187 77.0
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.6e-74 282.0 189 76.2
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.8e-73 279.6 187 77.5
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 3.0e-73 278.9 188 77.7
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 2.0e-72 276.2 190 72.1
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.5e-72 275.8 187 74.9
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.4e-72 274.2 186 75.3
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 6.3e-71 271.2 188 72.9
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 8.2e-71 270.8 190 71.1
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 8.2e-71 270.8 190 70.0
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 1.4e-70 270.0 185 75.1
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.4e-70 269.2 179 71.5
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 3.1e-70 268.9 178 75.8
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 9.1e-70 267.3 190 70.5
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.1e-70 267.3 179 71.5
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 9.1e-70 267.3 179 71.5
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 9.1e-70 267.3 177 75.1
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 4.5e-69 265.0 177 72.9
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 1.0e-68 263.8 170 74.7
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.7e-68 263.1 187 69.5
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.2e-68 262.7 180 70.6
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 2.2e-68 262.7 170 74.1
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 2.9e-68 262.3 188 71.3
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 2.9e-68 262.3 170 77.1
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 5.0e-68 261.5 188 68.6
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 6.5e-68 261.2 177 74.6
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 6.5e-68 261.2 176 71.0
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.1e-67 260.4 190 68.4
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 2.5e-67 259.2 173 74.0
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 9.4e-67 257.3 187 68.4
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 2.1e-66 256.1 175 72.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 2.1e-66 256.1 170 75.3
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 4.7e-66 255.0 172 71.5
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 6.1e-66 254.6 191 67.5
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 6.1e-66 254.6 170 71.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 1.0e-65 253.8 186 71.0
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 1.4e-65 253.4 180 71.1
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.8e-65 253.1 169 73.4
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 2.3e-65 252.7 172 70.9
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 3.9e-65 251.9 180 70.6
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 5.1e-65 251.5 194 67.5
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 6.7e-65 251.1 183 69.4
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 6.7e-65 251.1 177 73.4
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.6e-64 249.2 185 67.0
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 4.4e-64 248.4 189 65.6
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 9.7e-64 247.3 138 81.9
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.7e-63 246.5 179 70.4
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 2.8e-63 245.7 187 66.8
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.8e-63 245.7 173 69.9
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 4.8e-63 245.0 176 69.3
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.1e-62 243.8 178 71.3
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 3.1e-62 242.3 175 68.0
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.1e-62 242.3 155 77.4
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 4.1e-62 241.9 181 68.5
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 5.3e-62 241.5 175 67.4
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 5.3e-62 241.5 175 66.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 7.0e-62 241.1 148 77.0
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.2e-61 240.4 175 67.4
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.2e-61 240.4 175 67.4
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.2e-61 240.4 175 67.4
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.2e-61 240.4 175 67.4
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.2e-61 240.4 175 67.4
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.2e-61 240.4 139 80.6
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.5e-61 240.0 163 74.8
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 2.6e-61 239.2 178 66.9
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 3.5e-61 238.8 159 74.2
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 4.5e-61 238.4 175 64.6
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 7.7e-61 237.7 177 67.8
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 1.0e-60 237.3 175 66.3
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.0e-60 237.3 172 68.0
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.0e-60 237.3 175 66.3
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 2.2e-60 236.1 170 70.0
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 8.5e-60 234.2 136 80.1
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.5e-59 233.4 217 62.2
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.5e-59 232.6 177 64.4
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 3.2e-59 232.3 185 61.1
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 3.6e-58 228.8 186 61.8
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.8e-57 226.5 165 71.5
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.3e-55 220.3 146 72.6
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.7e-55 219.9 205 56.6
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 6.3e-55 218.0 171 66.7
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.3e-55 218.0 171 66.7
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.2e-55 217.6 164 68.3
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.0e-53 213.0 183 61.7
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.2e-52 209.5 156 69.9
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.9e-51 206.5 139 65.5
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 3.2e-51 205.7 151 67.5
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.6e-50 202.2 191 60.7
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 6.1e-50 201.4 165 63.0
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 1.0e-49 200.7 112 80.4
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.4e-46 189.5 185 53.5
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.1e-46 189.1 207 56.5
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 4.2e-43 178.7 163 56.4
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.8e-41 171.4 142 65.5
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.8e-40 167.5 146 61.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.9e-36 156.0 84 78.6
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 2.9e-36 156.0 140 56.4
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 1.5e-35 153.7 108 85.2
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 8.3e-31 137.9 150 48.7
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.2e-26 124.0 67 76.1
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 4.7e-26 122.1 94 75.5
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 4.4e-24 115.5 84 63.1
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.9e-19 100.1 67 67.2
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.1e-18 96.7 86 66.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 3.4e-16 89.4 62 66.1
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.4e-16 89.0 51 74.5
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.7e-13 79.7 101 48.5
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.9e-07 59.7 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.9e-06 57.0 87 33.3


User provided reference genes

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