Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 7.4e-83 310.5 153 100.0
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 4.4e-59 231.5 153 77.8
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.1e-53 212.6 154 68.2
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 4.4e-51 204.9 155 69.0
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.3e-47 193.4 154 59.7
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 5.5e-46 188.0 142 66.9
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 3.7e-42 175.3 154 57.8
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 9.2e-41 170.6 153 56.2
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 2.0e-40 169.5 154 55.8
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.3e-39 166.8 150 58.7
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.7e-39 166.4 154 55.8
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 2.3e-39 166.0 154 53.9
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.1e-38 163.7 154 54.5
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.5e-38 163.3 150 55.3
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.5e-38 163.3 157 54.8
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 2.5e-38 162.5 154 54.5
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 7.3e-38 161.0 155 54.2
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.6e-37 158.7 154 54.5
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 8.0e-37 157.5 159 53.5
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 4.0e-36 155.2 154 53.2
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 5.2e-36 154.8 86 79.1
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 6.8e-36 154.5 155 53.5
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.5e-35 153.3 131 57.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 2.0e-35 152.9 154 53.2
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 2.0e-35 152.9 154 53.2
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 4.4e-35 151.8 86 76.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 5.7e-35 151.4 143 55.2
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 5.7e-35 151.4 154 51.9
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 7.5e-35 151.0 154 53.2
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 7.5e-35 151.0 101 68.3
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 7.5e-35 151.0 110 65.5
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.2e-34 149.4 155 52.9
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 3.7e-34 148.7 155 49.7
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.7e-34 148.7 86 77.9
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 3.7e-34 148.7 111 67.6
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.9e-34 148.3 110 64.5
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.4e-34 147.9 152 52.0
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 6.4e-34 147.9 152 51.3
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 8.3e-34 147.5 105 66.7
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.1e-33 147.1 153 52.9
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.1e-33 147.1 153 52.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 1.1e-33 147.1 129 57.4
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 1.4e-33 146.7 156 50.6
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.4e-33 146.0 117 62.4
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 2.4e-33 146.0 154 51.9
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 4.1e-33 145.2 155 48.4
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.1e-33 145.2 87 73.6
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.1e-33 145.2 87 73.6
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 5.4e-33 144.8 155 49.7
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 7.0e-33 144.4 128 58.6
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 9.2e-33 144.1 130 55.4
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 3.5e-32 142.1 87 72.4
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 7.8e-32 141.0 98 66.3
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 1.0e-31 140.6 156 52.6
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 135 54.8
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.3e-31 139.4 88 71.6
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 6.6e-31 137.9 133 57.9
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 6.6e-31 137.9 119 61.3
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 8.6e-31 137.5 154 47.4
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 8.6e-31 137.5 135 51.9
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.9e-30 136.3 153 48.4
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.5e-30 136.0 100 64.0
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 7.3e-30 134.4 89 69.7
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 9.5e-30 134.0 158 47.5
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.5e-30 134.0 94 68.1
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.5e-30 134.0 94 68.1
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.5e-30 134.0 94 68.1
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 2.8e-29 132.5 160 45.0
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.8e-29 132.5 159 45.3
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 3.6e-29 132.1 100 63.0
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 4.7e-29 131.7 79 75.9
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 4.7e-29 131.7 158 46.2
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 8.0e-29 131.0 124 54.0
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 8.0e-29 131.0 90 70.0
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.8e-28 129.8 157 45.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 3.1e-28 129.0 100 61.0
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 5.2e-28 128.3 84 64.3
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 8.9e-28 127.5 160 44.4
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 8.9e-28 127.5 160 44.4
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.2e-27 127.1 98 60.2
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.2e-27 127.1 98 60.2
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.2e-27 127.1 98 60.2
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.5e-27 126.7 160 46.2
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.6e-27 125.9 152 48.0
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 3.4e-27 125.6 172 40.7
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 4.4e-27 125.2 87 65.5
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 5.8e-27 124.8 87 63.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 1.7e-26 123.2 75 70.7
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 4.1e-25 118.6 108 53.7
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.5e-22 110.2 109 52.3
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 7.3e-22 107.8 100 53.0
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.2e-21 107.1 77 59.7
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.6e-21 106.7 106 51.9
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 4.7e-21 105.1 87 60.9
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 5.2e-20 101.7 76 57.9
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 5.2e-20 101.7 89 51.7
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-16 90.1 98 50.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-16 90.1 98 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.7e-16 89.4 78 52.6
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.8e-12 76.6 104 44.2
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 6.8e-12 74.7 48 66.7


User provided reference genes

Program Settings