Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 9.1e-147 523.5 250 100.0
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 5.2e-118 427.9 250 79.2
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 8.9e-118 427.2 250 81.2
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 2.2e-116 422.5 246 78.9
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 6.4e-116 421.0 250 77.2
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 6.4e-116 421.0 250 77.2
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.1e-115 420.2 250 78.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 7.0e-115 417.5 250 76.4
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.0e-115 417.5 250 76.8
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 7.0e-115 417.5 250 77.2
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 7.8e-114 414.1 250 76.8
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.7e-113 412.9 250 76.0
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 5.0e-113 411.4 250 76.4
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 6.6e-113 411.0 251 75.7
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.5e-112 409.8 244 75.8
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.5e-112 409.1 251 76.1
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 7.3e-112 407.5 250 74.4
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.2e-111 406.8 250 74.4
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.2e-111 406.8 250 74.4
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.6e-111 406.4 251 75.3
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.6e-111 406.4 250 77.6
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 4.7e-111 404.8 252 74.2
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 8.0e-111 404.1 252 73.8
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.0e-110 403.7 250 74.8
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 3.1e-110 402.1 251 74.1
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 4.0e-110 401.7 251 74.1
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 8.9e-110 400.6 250 74.8
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 8.9e-110 400.6 251 73.7
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 2.0e-109 399.4 251 73.7
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 5.8e-109 397.9 250 73.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 5.8e-109 397.9 251 75.3
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 7.5e-109 397.5 250 74.0
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 1.7e-108 396.4 250 75.2
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.2e-108 396.0 250 72.8
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 1.9e-107 392.9 252 70.6
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 3.2e-107 392.1 252 71.0
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 3.2e-107 392.1 252 71.4
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.1e-107 391.7 246 71.5
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.2e-106 390.2 250 72.8
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.7e-106 389.0 250 70.8
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 3.5e-106 388.7 251 72.1
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 4.6e-106 388.3 250 72.0
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.0e-105 387.1 246 72.4
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 2.3e-105 386.0 250 70.4
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 2.3e-105 386.0 249 69.5
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.0e-105 385.6 250 70.4
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 3.0e-105 385.6 252 70.2
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 3.9e-105 385.2 250 71.2
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 5.0e-105 384.8 250 70.4
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 8.6e-105 384.0 250 72.4
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.2e-103 380.2 250 68.8
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.2e-103 380.2 252 67.9
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.6e-103 379.8 250 68.8
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 2.1e-103 379.4 252 69.0
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.6e-103 378.6 250 69.2
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 6.2e-103 377.9 252 68.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.8e-102 376.3 250 69.2
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.8e-102 376.3 250 68.8
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.8e-102 376.3 252 67.9
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 3.1e-102 375.6 246 68.7
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 6.8e-102 374.4 246 70.7
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 6.8e-102 374.4 252 67.5
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 8.9e-102 374.0 248 71.4
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.2e-101 373.6 250 69.2
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 3.4e-101 372.1 247 67.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 4.4e-101 371.7 254 67.7
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 5.8e-101 371.3 250 72.0
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 7.5e-101 370.9 250 69.2
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 2.2e-100 369.4 250 68.8
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 5.4e-99 364.8 252 64.7
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 64.3
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 64.7
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 64.7
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 64.7
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 64.7
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 2.7e-98 362.5 250 66.0
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 7.8e-98 360.9 252 64.7
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 7.8e-98 360.9 250 67.6
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 3.9e-97 358.6 250 65.6
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.1e-96 357.1 253 64.0
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.1e-96 357.1 252 62.7
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 1.1e-96 357.1 250 68.8
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.5e-96 355.9 251 66.1
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 3.3e-96 355.5 262 63.7
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 4.3e-96 355.1 250 64.8
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.8e-95 352.4 252 61.9
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.8e-95 352.4 245 66.9
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 2.8e-95 352.4 228 73.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 2.3e-94 349.4 252 62.3
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 2.3e-94 349.4 252 62.3
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 4.0e-94 348.6 245 66.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 2.0e-93 346.3 252 62.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.6e-93 345.9 250 61.6
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.1e-91 340.5 251 60.6
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 1.9e-88 329.7 247 60.3
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 4.7e-87 325.1 250 58.4
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.1e-86 323.9 239 64.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 2.9e-84 315.8 237 59.1
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 3.9e-81 305.4 203 69.0
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.7e-76 290.0 248 55.2
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 4.9e-76 288.5 249 55.0
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.4e-75 286.2 247 55.1
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 7.1e-75 284.6 247 54.7
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.3e-73 280.4 245 55.1
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 2.4e-70 269.6 250 52.0
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.0e-65 254.2 154 72.1
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.5e-61 240.4 251 47.0
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.7e-60 236.9 267 46.1
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 7.9e-58 228.0 139 79.9
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 8.5e-52 208.0 285 44.2
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.2e-50 204.1 259 46.7
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.9e-48 196.8 112 77.7
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 3.6e-42 176.0 99 87.9
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.0e-32 143.7 95 68.4
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 4.0e-25 119.4 100 64.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 8.8e-25 118.2 72 69.4
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.8e-22 110.5 160 43.1
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 4.0e-17 92.8 54 66.7
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 6.8e-17 92.0 53 69.8
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 2.5e-11 73.6 45 68.9
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.8e-07 60.1 111 33.3
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 1.1e-06 58.2 97 35.1
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 1.4e-06 57.8 111 32.4
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 2.4e-06 57.0 111 32.4
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 2.4e-06 57.0 121 32.2
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 7.0e-06 55.5 106 33.0
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 7.0e-06 55.5 115 29.6
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 9.2e-06 55.1 121 33.1


User provided reference genes

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