Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 5.1e-66 254.2 125 100.0
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 8.0e-59 230.3 125 90.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 8.0e-59 230.3 125 90.4
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 7.4e-57 223.8 123 88.6
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 1.6e-54 216.1 124 84.7
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 3.8e-53 211.5 125 82.4
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 5.0e-53 211.1 125 80.8
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 5.0e-53 211.1 118 86.4
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.1e-52 209.9 124 82.3
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 1.1e-52 209.9 125 83.2
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 2.5e-52 208.8 125 80.8
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 9.4e-52 206.8 125 81.6
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 2.1e-51 205.7 124 79.0
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 2.1e-51 205.7 124 79.0
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 2.3e-50 202.2 125 77.6
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 3.0e-50 201.8 123 79.7
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 6.7e-50 200.7 125 76.8
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 2.0e-49 199.1 118 80.5
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.4e-49 198.0 118 80.5
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 7.5e-49 197.2 125 76.8
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.3e-48 196.4 118 78.0
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.7e-48 196.1 125 76.0
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.2e-48 195.7 117 78.6
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 2.8e-48 195.3 123 76.4
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 4.8e-48 194.5 118 78.8
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 6.3e-48 194.1 122 78.7
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 6.3e-48 194.1 125 75.2
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.1e-47 193.4 118 78.0
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.4e-47 193.0 125 73.6
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.8e-47 192.6 123 74.8
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 1.8e-47 192.6 116 79.3
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 2.4e-47 192.2 125 75.2
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 2.4e-47 192.2 118 78.8
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 3.1e-47 191.8 125 74.4
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 3.1e-47 191.8 125 74.4
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 3.1e-47 191.8 125 74.4
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 5.3e-47 191.0 117 79.5
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.0e-47 190.7 118 78.0
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.0e-47 190.7 118 78.0
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 7.0e-47 190.7 125 72.0
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 9.1e-47 190.3 123 76.4
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.2e-46 189.9 125 72.8
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.2e-46 189.9 125 71.2
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-46 189.5 125 72.8
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.0e-46 189.1 118 76.3
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 2.0e-46 189.1 118 77.1
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.7e-46 188.7 123 74.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 3.5e-46 188.3 118 75.4
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 3.5e-46 188.3 125 72.0
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 3.5e-46 188.3 123 74.0
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 3.5e-46 188.3 125 72.0
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 3.5e-46 188.3 118 79.7
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 5.9e-46 187.6 125 70.4
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 7.7e-46 187.2 125 73.6
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.0e-45 186.8 125 72.0
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.0e-45 186.8 125 72.0
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.0e-45 186.8 125 72.0
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 1.0e-45 186.8 125 72.0
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.3e-45 186.4 125 72.0
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.3e-45 186.4 125 72.0
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.3e-45 186.4 125 72.0
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.7e-45 186.0 125 72.0
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.7e-45 186.0 125 72.0
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.7e-45 186.0 125 72.0
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 2.2e-45 185.7 125 72.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 2.2e-45 185.7 135 69.6
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.2e-45 185.7 116 77.6
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.2e-45 185.7 117 76.9
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 3.8e-45 184.9 125 70.4
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 5.0e-45 184.5 117 75.2
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 5.0e-45 184.5 125 68.8
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 8.5e-45 183.7 118 73.7
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.5e-44 182.2 105 81.9
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 4.2e-44 181.4 125 71.2
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 4.2e-44 181.4 125 70.4
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 4.2e-44 181.4 124 72.6
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 9.4e-44 180.3 123 71.5
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-43 179.9 111 77.5
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.2e-43 179.9 105 81.9
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 1.6e-43 179.5 120 75.8
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.1e-43 179.1 120 75.8
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.7e-43 178.7 120 71.7
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 2.7e-43 178.7 123 69.9
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 8.0e-43 177.2 120 75.0
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.0e-42 176.8 123 69.9
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.2e-42 174.5 120 74.2
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.2e-41 173.3 147 59.2
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 2.6e-41 172.2 105 76.2
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 9.8e-41 170.2 118 66.1
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 9.8e-41 170.2 122 68.0
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.8e-40 168.7 145 58.6
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.8e-40 168.7 128 68.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 6.3e-40 167.5 101 78.2
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 6.3e-40 167.5 120 68.3
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.3e-40 167.5 122 70.5
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 1.4e-39 166.4 100 79.0
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 7.0e-39 164.1 137 64.2
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 9.1e-39 163.7 130 66.9
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-38 163.3 101 77.2
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 3.5e-38 161.8 120 64.2
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 4.5e-38 161.4 122 69.7
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 7.7e-38 160.6 123 66.7
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 8.6e-37 157.1 113 66.4
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.5e-36 155.6 217 43.8
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.5e-36 155.6 120 63.3
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 7.2e-36 154.1 127 59.1
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.2e-35 153.3 125 63.2
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 4.0e-34 148.3 118 60.2
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 5.7e-33 144.4 107 67.3
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 8.3e-32 140.6 101 62.4
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.1e-31 140.2 88 76.1
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 1.1e-31 140.2 82 79.3
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 6.6e-29 131.0 115 62.6
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 8.6e-29 130.6 103 62.1
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.3e-28 128.3 81 77.8
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 6.8e-26 120.9 68 82.4
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 8.9e-26 120.6 74 79.7
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 4.4e-25 118.2 128 48.4
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.2e-24 115.9 86 58.1
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 8.3e-24 114.0 74 71.6
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.9e-23 112.8 74 71.6
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.0e-21 107.1 90 62.2
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.1e-20 103.6 95 56.8
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 2.8e-19 99.0 123 39.8
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 1.5e-17 93.2 61 73.8
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 3.4e-17 92.0 52 80.8
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 7.5e-17 90.9 70 61.4
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 1.1e-12 77.0 46 69.6
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 2.5e-12 75.9 131 39.7
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 2.2e-08 62.8 103 32.0


User provided reference genes

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