Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0048000 Rhododendron simsii HOM05D007296 ORTHO05D009201 2.0e-49 198.7 99 100.0
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 5.8e-20 100.9 132 48.5
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 4.9e-19 97.8 116 51.7
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.4e-18 96.3 114 52.6
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.1e-15 86.7 128 43.0
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 4.9e-11 71.2 87 47.1
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 6.4e-11 70.9 128 39.8
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.1e-10 70.1 82 43.9
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 2.7e-09 65.5 107 40.2
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 3.5e-09 65.1 68 50.0
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 7.8e-09 63.9 68 51.5
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 7.8e-09 63.9 70 50.0
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 2.3e-08 62.4 69 46.4
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 5.1e-08 61.2 70 45.7
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.1e-07 60.1 66 48.5
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.1e-07 60.1 68 48.5
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.9e-07 59.3 70 44.3
Atru.chr9.2613 Acer truncatum HOM05D007296 ORTHO05D009201 4.3e-07 58.2 68 47.1
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 4.3e-07 58.2 75 40.0
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 4.3e-07 58.2 73 43.8
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 4.3e-07 58.2 100 40.0
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 5.6e-07 57.8 69 46.4
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 7.3e-07 57.4 61 50.8
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 3.6e-06 55.1 68 45.6
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 6.2e-06 54.3 67 43.3
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 6.2e-06 54.3 73 45.2
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 6.2e-06 54.3 68 42.6
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 8.1e-06 53.9 68 44.1
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 8.1e-06 53.9 70 40.0


User provided reference genes

Program Settings