Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 3.4e-141 505.0 256 100.0
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.3e-124 449.9 266 87.6
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.3e-111 406.8 248 82.7
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 6.3e-111 404.4 255 80.0
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 9.4e-107 390.6 242 81.8
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 4.0e-105 385.2 256 78.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.5e-104 383.3 254 75.6
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.7e-104 381.3 254 75.2
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 4.5e-101 371.7 254 72.4
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 2.2e-100 369.4 255 73.7
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 2.9e-100 369.0 254 74.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.9e-100 369.0 257 72.8
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 2.9e-100 369.0 253 73.1
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.5e-100 367.5 255 71.4
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.9e-99 366.3 254 73.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 2.5e-99 365.9 249 75.5
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 3.2e-99 365.5 252 73.0
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 5.5e-99 364.8 258 72.5
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.2e-98 363.6 257 72.0
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 1.6e-98 363.2 243 76.1
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 4.7e-98 361.7 247 72.1
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.7e-98 361.7 240 74.6
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 6.1e-98 361.3 286 66.4
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 8.0e-98 360.9 254 72.4
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 8.0e-98 360.9 245 72.7
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.8e-97 359.8 248 73.4
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.3e-97 359.4 249 71.9
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 8.8e-97 357.5 246 73.2
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 4.4e-96 355.1 253 71.5
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 3.7e-95 352.1 248 73.0
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 4.8e-95 351.7 257 69.6
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.8e-94 349.7 257 69.3
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.8e-94 349.7 258 69.8
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 5.4e-94 348.2 250 69.2
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 5.4e-94 348.2 242 71.5
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 7.0e-94 347.8 247 73.3
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.2e-93 347.1 244 73.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.5e-93 345.5 254 69.3
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 7.7e-93 344.4 257 69.3
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.0e-92 344.0 289 64.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.0e-92 344.0 257 67.7
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 1.7e-92 343.2 241 72.6
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.7e-92 343.2 254 69.7
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.3e-92 342.8 242 71.1
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 2.3e-92 342.8 242 71.5
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 5.0e-92 341.7 234 74.8
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 6.6e-92 341.3 245 70.6
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.1e-91 340.5 242 71.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 1.1e-91 340.5 251 70.1
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.5e-91 339.3 252 70.2
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 5.5e-91 338.2 248 67.3
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 5.5e-91 338.2 254 69.3
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 7.2e-91 337.8 254 69.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 4.7e-90 335.1 257 67.7
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 6.1e-90 334.7 257 66.5
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 8.0e-90 334.3 251 66.9
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.0e-89 334.0 284 63.7
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.8e-89 333.2 254 66.5
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.8e-89 333.2 255 67.5
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 2.3e-89 332.8 284 63.4
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 4.0e-89 332.0 283 63.6
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 8.9e-89 330.9 251 67.7
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.5e-88 330.1 283 63.6
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 2.6e-88 329.3 245 66.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 2.6e-88 329.3 240 70.8
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 3.4e-88 328.9 247 66.8
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 4.4e-88 328.6 247 66.8
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 5.7e-88 328.2 247 66.4
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.3e-87 327.0 245 66.5
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 1.7e-87 326.6 255 64.7
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.9e-87 325.1 259 64.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 6.3e-87 324.7 246 66.7
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 6.3e-87 324.7 246 66.7
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.4e-86 323.6 256 64.1
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.1e-86 322.4 245 67.3
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.1e-86 322.4 245 67.3
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 4.1e-86 322.0 265 61.5
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.2e-85 320.5 243 66.7
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.6e-85 320.1 243 66.7
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.0e-85 319.7 259 63.7
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 5.9e-85 318.2 271 63.5
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 7.8e-85 317.8 237 67.5
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 2.9e-84 315.8 276 63.0
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.3e-83 312.0 238 65.5
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 4.7e-82 308.5 250 63.6
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.0e-81 307.4 242 67.4
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 4.0e-81 305.4 222 70.3
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.2e-80 303.9 274 60.9
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 4.4e-80 302.0 241 66.8
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 5.4e-78 295.0 255 58.0
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.0e-76 290.8 295 55.6
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 3.9e-76 288.9 227 62.6
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.5e-75 287.0 248 64.9
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 3.3e-75 285.8 231 64.1
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 3.4e-72 275.8 296 51.4
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 7.5e-72 274.6 245 58.4
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 4.1e-70 268.9 191 72.3
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 2.4e-62 243.0 177 71.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 4.2e-54 215.7 227 54.2
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.5e-51 207.2 132 75.8
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 5.6e-51 205.3 266 44.0
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 3.1e-49 199.5 279 40.9
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 4.0e-49 199.1 263 49.0
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 3.8e-47 192.6 128 69.5
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 2.1e-45 186.8 255 44.3
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.7e-44 183.7 248 48.4
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 7.3e-43 178.3 172 51.2
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 8.1e-34 148.3 121 60.3
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 2.2e-31 140.2 125 60.0
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.2e-30 136.0 152 54.6
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.5e-19 100.9 106 57.5
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 2.5e-19 100.1 159 36.5
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 4.3e-19 99.4 122 50.0
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 8.8e-12 75.1 47 72.3
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.1e-09 68.2 38 86.8
Actinidia36204 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.8e-07 59.7 71 56.3
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.4e-06 57.8 51 47.1
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 5.5e-06 55.8 137 34.3


User provided reference genes

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