Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.1e-66 256.9 175 100.0
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.2e-31 140.6 180 55.0
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.5e-31 140.2 103 65.0
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 2.0e-31 139.8 102 66.7
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.4e-31 138.7 180 54.4
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 4.4e-31 138.7 99 64.6
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 9.8e-31 137.5 174 61.5
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.3e-30 137.1 105 64.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.9e-30 136.0 101 61.4
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 6.4e-30 134.8 105 63.8
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 8.3e-30 134.4 104 63.5
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.1e-29 134.0 102 63.7
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.9e-29 133.3 109 60.6
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.4e-29 132.9 109 60.6
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 5.4e-29 131.7 99 61.6
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 7.0e-29 131.3 165 44.8
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 7.0e-29 131.3 165 44.8
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 9.2e-29 131.0 104 59.6
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 9.2e-29 131.0 102 64.7
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 9.2e-29 131.0 102 64.7
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 9.2e-29 131.0 102 64.7
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 9.2e-29 131.0 109 59.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.2e-28 130.6 99 61.6
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.0e-28 129.8 102 64.7
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 2.0e-28 129.8 91 65.9
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.0e-28 129.8 114 58.8
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 2.7e-28 129.4 102 63.7
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 2.7e-28 129.4 102 63.7
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 2.7e-28 129.4 105 61.9
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 2.7e-28 129.4 166 55.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 3.5e-28 129.0 89 68.5
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 6.0e-28 128.3 102 60.8
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 7.8e-28 127.9 100 63.0
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.0e-27 127.5 101 60.4
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.0e-27 127.5 71 80.3
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 1.0e-27 127.5 103 62.1
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.3e-27 127.1 105 61.0
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.3e-27 127.1 104 58.7
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.7e-27 126.7 101 60.4
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.3e-27 126.3 101 59.4
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.3e-27 126.3 106 58.5
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.3e-27 126.3 100 59.0
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 3.0e-27 125.9 106 56.6
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.0e-27 125.9 101 57.4
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 3.0e-27 125.9 96 62.5
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.9e-27 125.6 71 78.9
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 5.0e-27 125.2 109 56.9
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 8.6e-27 124.4 100 59.0
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.1e-26 124.0 100 62.0
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 124.0 79 72.2
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 124.0 79 72.2
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 1.5e-26 123.6 96 61.5
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 2.5e-26 122.9 98 58.2
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 2.5e-26 122.9 98 63.3
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 2.5e-26 122.9 106 58.5
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 3.3e-26 122.5 74 68.9
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 4.3e-26 122.1 101 59.4
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 5.6e-26 121.7 95 60.0
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 7.3e-26 121.3 101 60.4
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 7.3e-26 121.3 104 55.8
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 9.5e-26 120.9 99 58.6
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 9.5e-26 120.9 93 63.4
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.2e-25 120.6 74 71.6
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 4.7e-25 118.6 108 56.5
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 4.7e-25 118.6 97 61.9
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 4.7e-25 118.6 97 61.9
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 4.7e-25 118.6 107 55.1
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.2e-25 118.2 69 73.9
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.1e-24 117.5 72 70.8
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.1e-24 117.5 71 71.8
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-24 117.5 71 71.8
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-24 117.5 71 71.8
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-24 117.5 71 71.8
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.4e-24 117.1 75 72.0
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.8e-24 116.7 71 74.6
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.8e-24 116.7 99 61.6
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.8e-24 116.7 75 66.7
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.3e-24 116.3 96 58.3
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 3.1e-24 115.9 75 70.7
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.0e-24 115.5 75 70.7
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 5.2e-24 115.2 102 57.8
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 6.8e-24 114.8 106 54.7
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 6.8e-24 114.8 89 60.7
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.2e-23 114.0 100 56.0
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.2e-23 114.0 104 56.7
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.5e-23 113.6 94 61.7
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.0e-23 113.2 97 57.7
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 2.0e-23 113.2 96 57.3
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.0e-23 113.2 89 59.6
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 3.4e-23 112.5 95 55.8
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 2.9e-22 109.4 90 57.8
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-21 106.7 80 67.5
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.2e-20 104.0 81 60.5
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.0e-19 100.9 93 52.7
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 2.5e-18 96.3 67 67.2
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 5.6e-18 95.1 94 52.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 3.6e-17 92.4 73 61.6
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 9.9e-15 84.3 61 57.4
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.7e-14 82.4 86 43.0
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 3.8e-06 55.8 63 41.3
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 6.4e-06 55.1 85 31.8


User provided reference genes

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