Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0024000 Rhododendron simsii HOM05D000026 ORTHO05D001436 5.1e-63 244.2 119 100.0
Rhsim08G0024700 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.3e-37 159.8 119 70.6
Rhsim08G0024900 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.4e-36 155.6 118 66.1
Rhsim08G0020600 Rhododendron simsii HOM05D002060 ORTHO05D002098 2.0e-35 152.5 119 68.1
Rhsim08G0024100 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.0e-35 152.5 118 65.3
Rhsim08G0024200 Rhododendron simsii HOM05D000026 ORTHO05D001436 4.9e-34 147.9 120 64.2
Rhsim08G0025000 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.1e-33 146.7 119 63.9
Rhsim08G0024300 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.4e-33 146.4 120 64.2
vmacro15358 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 1.5e-27 126.3 114 59.6
Rhsim08G0025200 Rhododendron simsii HOM05D000026 ORTHO05D001436 7.6e-27 124.0 122 54.9
Rhsim08G0024400 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.7e-26 122.9 124 57.3
Rhsim08G0025100 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.3e-23 112.5 109 56.9
Actinidia28760 Actinidia chinensis HOM05D000026 ORTHO05D001436 9.7e-22 107.1 113 52.2
vmacro18481 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 4.5e-19 98.2 116 51.7
Dinv28287 Davidia involucrata HOM05D000026 ORTHO05D001436 1.4e-17 93.2 125 47.2
Actinidia35693 Actinidia chinensis HOM05D000026 ORTHO05D001436 3.9e-15 85.1 103 51.5
Nitab4.5_0012341g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 5.7e-14 81.3 110 42.7
Nitab4.5_0011544g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.8e-13 78.2 110 41.8
Haze_03651 Corylus avellana HOM05D000026 ORTHO05D001436 8.2e-13 77.4 121 40.5
Potri.001G455500 Populus trichocarpa HOM05D000026 ORTHO05D001436 1.8e-12 76.3 117 43.6
Sabra16G0308100 Salix brachista HOM05D000026 ORTHO05D001436 4.1e-12 75.1 102 45.1
CSS0022457 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001436 5.3e-12 74.7 123 43.9
Cfa007122 Carpinus fangiana HOM05D000026 ORTHO05D001436 6.9e-12 74.3 122 40.2
CANSAT56G1422 Cannabis sativa HOM05D000026 ORTHO05D001436 9.1e-12 73.9 86 46.5
Oeu023347.1 Olea europaea HOM05D000026 ORTHO05D001436 9.1e-12 73.9 111 41.4
Nitab4.5_0002860g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.5e-11 73.2 112 41.1
Dinv19110 Davidia involucrata HOM05D000026 ORTHO05D001436 2.0e-11 72.8 124 41.9
AUR62029521 Chenopodium quinoa HOM05D000026 ORTHO05D001436 2.6e-11 72.4 101 44.6
Migut.D02008 Erythranthe guttata HOM05D000026 ORTHO05D001436 4.5e-11 71.6 104 40.4
Rhsim08G0024800 Rhododendron simsii HOM05D000026 ORTHO05D001436 4.5e-11 71.6 47 70.2
Nitab4.5_0008108g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 5.9e-11 71.2 109 41.3
TWI09G0726 Tripterygium wilfordii HOM05D000026 ORTHO05D001436 5.9e-11 71.2 95 43.2
Potri.011G146500 Populus trichocarpa HOM05D000026 ORTHO05D001436 7.7e-11 70.9 110 39.1
Sabra11G0131400 Salix brachista HOM05D000026 ORTHO05D001436 7.7e-11 70.9 104 41.3
Nitab4.5_0004507g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.0e-10 70.5 109 39.4
Cc07_g12360 Coffea canephora HOM05D000026 ORTHO05D001436 1.3e-10 70.1 130 40.8
MBI04_g23328_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D001436 1.7e-10 69.7 109 36.7
Thecc.04G122600 Theobroma cacao HOM05D000026 ORTHO05D001436 2.2e-10 69.3 90 45.6
Nitab4.5_0000304g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.8e-10 68.6 109 38.5
GSVIVG01026418001 Vitis vinifera HOM05D000026 ORTHO05D001436 3.8e-10 68.6 111 42.3
CAN.G883.11 Capsicum annuum HOM05D000026 ORTHO05D001436 6.5e-10 67.8 110 37.3
HanXRQChr15g0485171 Helianthus annuus HOM05D000026 ORTHO05D001436 8.5e-10 67.4 110 38.2
Peaxi162Scf00918g00415 Petunia axillaris HOM05D000026 ORTHO05D001436 8.5e-10 67.4 111 39.6
Peaxi162Scf00981g00110 Petunia axillaris HOM05D000026 ORTHO05D001436 8.5e-10 67.4 111 37.8
Actinidia17136 Actinidia chinensis HOM05D000026 ORTHO05D001436 1.1e-09 67.0 121 39.7
AUR62003328 Chenopodium quinoa HOM05D000026 ORTHO05D001436 1.4e-09 66.6 79 46.8
Duzib138G1199 Durio zibethinus HOM05D000026 ORTHO05D001436 1.9e-09 66.2 100 41.0
Migut.L00083 Erythranthe guttata HOM05D000026 ORTHO05D001436 1.9e-09 66.2 109 40.4
HanXRQChr15g0478911 Helianthus annuus HOM05D000026 ORTHO05D001436 2.5e-09 65.9 122 37.7
Rhsim10G0189200 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.5e-09 65.9 121 37.2
Lj2g0015695 Lotus japonicus HOM05D000026 ORTHO05D001436 5.5e-09 64.7 83 39.8
SGA_v2.0_scaffold132G34549 Striga asiatica HOM05D000026 ORTHO05D001436 5.5e-09 64.7 111 38.7
TAR381G0663 Trochodendron aralioides HOM05D000026 ORTHO05D001436 5.5e-09 64.7 110 38.2
TAR381G0752 Trochodendron aralioides HOM05D000026 ORTHO05D001436 5.5e-09 64.7 110 38.2
Hma1.2p1_0085F.1_g044200 Hydrangea macrophylla HOM05D000026 ORTHO05D001436 7.2e-09 64.3 118 37.3
DCAR_014128 Daucus carota HOM05D000026 ORTHO05D001436 9.4e-09 63.9 104 43.3
FAN23G0177 Fragaria x ananassa HOM05D000026 ORTHO05D001436 9.4e-09 63.9 115 36.5
FAN23G0895 Fragaria x ananassa HOM05D000026 ORTHO05D001436 9.4e-09 63.9 89 40.4
FAN26G2358 Fragaria x ananassa HOM05D000026 ORTHO05D001436 9.4e-09 63.9 115 36.5
Gohir.D07G081400 Gossypium hirsutum HOM05D000026 ORTHO05D001436 9.4e-09 63.9 108 39.8
Gorai.001G086500 Gossypium raimondii HOM05D000026 ORTHO05D001436 9.4e-09 63.9 108 39.8
Psat2g147000 Pisum sativum HOM05D000026 ORTHO05D001436 9.4e-09 63.9 112 37.5
Sopen02g017400 Solanum pennellii HOM05D000026 ORTHO05D001436 1.6e-08 63.2 94 36.2
Solyc02g068300.3 Solanum lycopersicum HOM05D000026 ORTHO05D001436 2.1e-08 62.8 109 34.9
Ah.02g119240 Amaranthus hybridus HOM05D000026 ORTHO05D001436 2.7e-08 62.4 88 44.3
Aqoxy6G03055 Aquilegia oxysepala HOM05D000026 ORTHO05D001436 2.7e-08 62.4 108 36.1
Glyma.01G155600 Glycine max HOM05D000026 ORTHO05D001436 2.7e-08 62.4 104 39.4
Manes.02G117800 Manihot esculenta HOM05D000026 ORTHO05D001436 2.7e-08 62.4 116 38.8
Peaxi162Scf00920g00026 Petunia axillaris HOM05D000026 ORTHO05D001436 2.7e-08 62.4 118 39.0
Nitab4.5_0007373g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.6e-08 62.0 110 36.4
Psat2g147040 Pisum sativum HOM05D000026 ORTHO05D001436 3.6e-08 62.0 112 36.6
PGSC0003DMG401009415 Solanum tuberosum HOM05D000026 ORTHO05D001436 3.6e-08 62.0 87 36.8
Hma1.2p1_0085F.1_g044230 Hydrangea macrophylla HOM05D000026 ORTHO05D001436 4.7e-08 61.6 121 38.0
RhsimUnG0242600 Rhododendron simsii HOM05D000026 ORTHO05D001436 4.7e-08 61.6 106 40.6
Gohir.A07G076600 Gossypium hirsutum HOM05D000026 ORTHO05D001436 7.9e-08 60.8 89 39.3
Prupe.7G188700 Prunus persica HOM05D000026 ORTHO05D001436 7.9e-08 60.8 112 39.3
COL.COLO4_15700 Corchorus olitorius HOM05D000026 ORTHO05D001436 1.0e-07 60.5 83 42.2
Lj4A246T77 Lonicera japonica HOM05D000026 ORTHO05D001436 1.0e-07 60.5 116 37.1
TPR.G33751 Trifolium pratense HOM05D000026 ORTHO05D001436 1.0e-07 60.5 105 38.1
Eucgr.L02496 Eucalyptus grandis HOM05D000026 ORTHO05D001436 1.4e-07 60.1 86 39.5
RcHm_v2.0_Chr2g0096621 Rosa chinensis HOM05D000026 ORTHO05D001436 1.4e-07 60.1 87 40.2
ATR0122G032 Amborella trichopoda HOM05D000026 ORTHO05D001436 1.8e-07 59.7 106 35.8
Ca_25025_v3 Cicer arietinum L. HOM05D000026 ORTHO05D001436 1.8e-07 59.7 107 38.3
MD15G1226500 Malus domestica HOM05D000026 ORTHO05D001436 1.8e-07 59.7 103 39.8
Rhsim10G0189000 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.8e-07 59.7 108 36.1
FAN28G0417 Fragaria x ananassa HOM05D000026 ORTHO05D001436 2.3e-07 59.3 89 39.3
Glyma.11G089100 Glycine max HOM05D000026 ORTHO05D001436 2.3e-07 59.3 104 39.4
Nitab4.5_0000304g0060 Nicotiana tabacum HOM05D000026 ORTHO05D001436 2.3e-07 59.3 110 36.4
Rhsim10G0189900 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.3e-07 59.3 110 38.2
RhsimUnG0127400 Rhododendron simsii HOM05D000026 ORTHO05D001436 3.0e-07 58.9 110 36.4
HanXRQChr16g0532621 Helianthus annuus HOM05D000026 ORTHO05D001436 3.9e-07 58.5 120 35.8
Lsat_1_v5_gn_3_68600 Lactuca sativa HOM05D000026 ORTHO05D001436 5.1e-07 58.2 120 36.7
Lalb_Chr16g0380271 Lupinus albus HOM05D000026 ORTHO05D001436 6.7e-07 57.8 84 40.5
Rhsim10G0190000 Rhododendron simsii HOM05D000026 ORTHO05D001436 6.7e-07 57.8 110 38.2
FAN19G0303 Fragaria x ananassa HOM05D000026 ORTHO05D001436 8.8e-07 57.4 89 38.2
QL06p053545 Quercus lobata HOM05D000026 ORTHO05D001436 8.8e-07 57.4 123 40.7
Rhsim10G0190100 Rhododendron simsii HOM05D000026 ORTHO05D001436 1.1e-06 57.0 107 37.4
ATR0605G290 Amborella trichopoda HOM05D000026 ORTHO05D001436 1.5e-06 56.6 83 41.0
MD02G1107300 Malus domestica HOM05D000026 ORTHO05D001436 1.5e-06 56.6 80 45.0
RhsimUnG0057800 Rhododendron simsii HOM05D000026 ORTHO05D001436 2.0e-06 56.2 88 43.2
SalBow5G1423 Salvia bowleyana HOM05D000026 ORTHO05D001436 2.0e-06 56.2 106 37.7
MELO3C015686.2 Cucumis melo HOM05D000026 ORTHO05D001436 4.4e-06 55.1 104 33.7
Rhsim10G0189300 Rhododendron simsii HOM05D000026 ORTHO05D001436 4.4e-06 55.1 117 38.5
RhsimUnG0127500 Rhododendron simsii HOM05D000026 ORTHO05D001436 4.4e-06 55.1 111 36.0
vmacro20417 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 5.7e-06 54.7 126 35.7
Actinidia17135 Actinidia chinensis HOM05D000026 ORTHO05D001436 7.4e-06 54.3 93 40.9
Eucgr.J02577 Eucalyptus grandis HOM05D000026 ORTHO05D001436 7.4e-06 54.3 79 39.2
Eucgr.I02181 Eucalyptus grandis HOM05D000026 ORTHO05D001436 9.7e-06 53.9 80 37.5


User provided reference genes

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