Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0016000 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.0e-46 187.2 97 100.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 7.6e-17 90.5 88 54.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-13 79.3 125 39.2
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.3e-13 79.0 124 40.3
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-12 75.9 114 41.2
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 5.7e-12 74.3 143 34.3
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-11 73.2 118 38.1
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-11 72.4 149 33.6
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 6.3e-11 70.9 149 33.6
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 8.2e-11 70.5 149 32.9
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-10 70.1 149 32.9
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-10 69.3 149 32.2
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 3.1e-10 68.6 150 31.3
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-10 68.2 105 37.1
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 4.1e-10 68.2 142 32.4
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-10 68.2 146 32.9
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 5.3e-10 67.8 149 32.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-10 67.0 149 32.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 1.2e-09 66.6 149 32.2
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-09 66.2 149 31.5
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 2.0e-09 65.9 75 45.3
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 4.5e-09 64.7 49 65.3
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-09 64.3 45 68.9
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 5.9e-09 64.3 45 68.9
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 5.9e-09 64.3 149 31.5
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-09 64.3 45 68.9
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 5.9e-09 64.3 45 68.9
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 5.9e-09 64.3 45 68.9
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-09 64.3 45 68.9
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 5.9e-09 64.3 45 68.9
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 5.9e-09 64.3 45 68.9
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-09 64.3 45 68.9
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-09 64.3 45 68.9
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-09 63.9 45 66.7
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-09 63.9 45 68.9
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.5 43 72.1
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 1.3e-08 63.2 62 53.2
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.2 45 66.7
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.7e-08 62.8 56 57.1
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 62.8 45 66.7
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 2.2e-08 62.4 51 54.9
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-08 62.4 50 62.0
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 2.2e-08 62.4 49 61.2
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-08 61.6 45 66.7
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-08 61.2 45 66.7
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 5.0e-08 61.2 56 53.6
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-08 60.8 56 55.4
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-08 60.8 45 66.7
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 8.5e-08 60.5 51 56.9
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 8.5e-08 60.5 45 62.2
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-08 60.5 45 66.7
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-08 60.5 45 64.4
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.1e-07 60.1 45 64.4
Ca_07474_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 1.4e-07 59.7 58 50.0
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-07 59.7 51 56.9
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-07 59.3 54 53.7
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.9e-07 59.3 59 52.5
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.3 45 64.4
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.5e-07 58.9 59 52.5
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.5e-07 58.9 59 52.5
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.5e-07 58.9 56 51.8
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.5e-07 58.9 59 52.5
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.5e-07 58.9 51 56.9
SHI36442 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 45 64.4
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.2e-07 58.5 56 55.4
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-07 58.5 62 48.4
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 4.2e-07 58.2 141 29.8
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.2e-07 58.2 51 54.9
CSS0049081 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 7.2e-07 57.4 59 49.2
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-07 57.0 49 55.1
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 9.3e-07 57.0 56 53.6
CSS0034688 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-06 56.6 56 53.6
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-06 56.6 51 54.9
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 45 64.4
CSS0037656 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-06 56.2 49 53.1
CSS0050399 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.6e-06 56.2 48 54.2
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 2.1e-06 55.8 47 57.4
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-06 55.8 88 38.6
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-06 55.5 55 52.7
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-06 55.5 55 52.7
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-06 55.5 55 52.7
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-06 55.5 55 52.7
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 2.7e-06 55.5 105 31.4
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 3.6e-06 55.1 47 57.4
Hma1.2p1_1655F.1_g295950 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 3.6e-06 55.1 43 62.8
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 4.6e-06 54.7 52 48.1
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 4.6e-06 54.7 145 29.7
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 6.1e-06 54.3 71 40.8
CSS0020284 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-06 54.3 58 50.0


User provided reference genes

Program Settings