Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 4.8e-158 561.2 306 100.0
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.4e-109 399.4 249 88.4
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 5.2e-96 355.1 247 74.9
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 4.6e-92 342.0 197 84.3
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.6e-92 342.0 202 82.2
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.7e-91 340.1 197 84.3
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.7e-91 340.1 198 83.8
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.3e-91 339.7 198 83.8
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 3.0e-91 339.3 200 81.5
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 3.0e-91 339.3 197 82.7
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 3.9e-91 339.0 197 82.7
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 3.9e-91 339.0 197 82.7
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.1e-90 337.4 198 82.8
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 1.5e-90 337.0 200 80.5
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.9e-90 336.7 200 80.5
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 2.5e-90 336.3 196 83.2
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 3.3e-90 335.9 197 82.7
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 4.3e-90 335.5 200 80.0
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 5.6e-90 335.1 197 81.7
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 7.3e-90 334.7 200 80.0
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 7.3e-90 334.7 197 82.7
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 9.6e-90 334.3 197 82.2
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.2e-89 334.0 197 82.2
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.2e-89 334.0 200 79.5
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.6e-89 333.6 197 81.7
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.8e-89 332.8 196 82.1
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 3.6e-89 332.4 197 81.7
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 4.7e-89 332.0 200 80.0
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 4.7e-89 332.0 197 80.7
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 8.1e-89 331.3 197 80.2
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.8e-88 330.1 200 78.5
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.8e-88 330.1 197 80.2
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.4e-88 329.7 197 80.7
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 3.1e-88 329.3 197 79.7
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 3.1e-88 329.3 197 79.7
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 4.0e-88 328.9 197 81.2
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 9.0e-88 327.8 188 85.6
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 9.0e-88 327.8 200 79.5
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.2e-87 327.4 199 78.4
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.0e-87 326.6 200 78.0
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.6e-87 326.2 196 81.1
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 4.4e-87 325.5 197 80.2
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 4.4e-87 325.5 197 80.2
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 4.4e-87 325.5 247 68.4
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 7.6e-87 324.7 197 78.7
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.3e-86 323.9 198 79.8
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.7e-86 323.6 199 78.9
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.2e-86 323.2 200 78.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 2.2e-86 323.2 199 78.4
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 2.2e-86 323.2 194 80.9
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.8e-86 322.4 193 80.8
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 4.9e-86 322.0 197 77.7
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 6.4e-86 321.6 198 76.8
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 8.4e-86 321.2 197 77.7
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 8.4e-86 321.2 197 77.7
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 8.4e-86 321.2 198 78.3
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.4e-85 319.7 197 92.4
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 3.2e-85 319.3 197 77.7
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 3.2e-85 319.3 199 78.9
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 4.2e-85 318.9 201 75.6
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 5.4e-85 318.5 197 77.2
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.6e-84 317.0 200 81.0
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.6e-84 317.0 198 76.8
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.6e-84 317.0 197 78.2
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.6e-84 315.5 200 76.5
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 3.9e-83 312.4 199 75.9
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.9e-83 312.4 202 74.8
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.7e-83 311.2 202 74.3
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.1e-82 310.8 187 78.6
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.5e-82 309.7 200 74.5
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.3e-81 307.4 196 77.0
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 1.3e-81 307.4 197 76.1
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 2.1e-81 306.6 197 74.6
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 2.8e-81 306.2 197 74.6
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 3.6e-81 305.8 197 74.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.6e-81 305.8 202 75.2
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 8.1e-81 304.7 197 74.6
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 8.1e-81 304.7 197 74.6
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 8.1e-81 304.7 197 74.6
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 2.4e-80 303.1 200 74.5
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 5.3e-80 302.0 197 76.1
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 5.3e-80 302.0 202 74.3
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 2.0e-79 300.1 198 72.2
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 2.6e-79 299.7 195 74.4
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 2.6e-79 299.7 202 72.3
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.2e-77 292.7 199 71.9
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 2.7e-76 289.7 163 85.9
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.3e-75 286.6 194 70.6
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.1e-74 284.3 197 68.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.5e-74 283.9 168 82.1
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 8.1e-73 278.1 193 68.9
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 4.0e-64 249.2 132 93.2
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 3.8e-62 242.7 191 59.2
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.6e-57 227.3 161 74.5
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 4.1e-56 222.6 132 82.6
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 6.7e-51 205.3 221 52.0
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.5e-50 203.4 221 52.0
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 7.4e-50 201.8 135 73.3
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.0e-47 193.7 188 50.5
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 6.1e-44 182.2 143 58.0
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.3e-42 176.4 131 67.2
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.4e-42 175.3 114 81.6
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.3e-40 169.1 228 44.7
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 2.6e-39 166.8 183 46.4
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 5.9e-39 165.6 96 84.4
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.2e-37 158.7 93 83.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.6e-34 150.2 95 74.7
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 4.1e-32 142.9 122 59.8
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.6e-31 140.2 98 72.4
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.5e-31 139.4 98 69.4
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 8.5e-30 135.2 145 48.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 8.0e-28 128.6 201 36.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 4.0e-27 126.3 129 55.0
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.5e-26 124.4 187 38.0
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.6e-20 104.4 71 64.8
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 2.6e-18 97.1 55 80.0
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.4e-16 90.5 52 82.7
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 7.0e-16 89.0 52 82.7
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.0e-15 87.4 52 80.8
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.7e-15 87.0 56 73.2
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.2e-12 78.2 65 58.5
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 6.1e-12 75.9 49 73.5
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 5.4e-08 62.8 40 72.5
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.2e-07 61.6 67 52.2
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.3e-06 58.2 43 72.1


User provided reference genes

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