Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0004800 Rhododendron simsii HOM05D008370 ORTHO05D009732 4.6e-39 164.1 82 100.0
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 8.7e-14 80.1 82 54.9
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 2.5e-13 78.6 82 58.5
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 3.1e-11 71.6 83 50.6
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 9.0e-11 70.1 82 50.0
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.2e-10 69.7 89 51.7
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.0e-10 68.9 76 53.9
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 5.8e-10 67.4 82 51.2
Sabra05G0071700 Salix brachista HOM05D008370 ORTHO05D009732 5.8e-10 67.4 82 47.6
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 1.7e-09 65.9 84 51.2
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 1.7e-09 65.9 87 48.3
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 1.7e-09 65.9 82 51.2
Atru.chr4.716 Acer truncatum HOM05D008370 ORTHO05D009732 2.9e-09 65.1 88 42.0
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 2.9e-09 65.1 83 54.2
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 2.9e-09 65.1 82 51.2
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 1.1e-08 63.2 82 50.0
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 1.4e-08 62.8 82 47.6
Cc07_g16670 Coffea canephora HOM05D008370 ORTHO05D009732 1.9e-08 62.4 82 45.1
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 5.5e-08 60.8 85 41.2
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 7.1e-08 60.5 82 47.6
Ciclev10026869m.g Citrus clementina HOM05D008370 ORTHO05D009732 9.3e-08 60.1 84 42.9
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 9.3e-08 60.1 82 48.8
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 9.3e-08 60.1 85 41.2
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 9.3e-08 60.1 90 45.6
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 1.2e-07 59.7 83 43.4
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 1.2e-07 59.7 84 48.8
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 2.7e-07 58.5 84 42.9
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 2.7e-07 58.5 85 48.2
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 2.7e-07 58.5 90 47.8
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 3.5e-07 58.2 78 47.4
Psat5g065200 Pisum sativum HOM05D010746 ORTHO05D009732 3.5e-07 58.2 88 42.0
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 3.5e-07 58.2 84 48.8
arahy.Tifrunner.gnm1.ann1.3XNV5U Arachis hypogaea HOM05D008370 ORTHO05D009732 4.6e-07 57.8 89 44.9
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 7.9e-07 57.0 83 47.0
Gohir.D01G030000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.0e-06 56.6 85 42.4
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 1.3e-06 56.2 83 48.2
Gohir.D03G047500 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.3e-06 56.2 83 47.0
TPR.G227 Trifolium pratense HOM05D010746 ORTHO05D009732 1.3e-06 56.2 88 42.0
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 1.8e-06 55.8 87 44.8
Lalb_Chr07g0184691 Lupinus albus HOM05D010746 ORTHO05D009732 2.3e-06 55.5 82 41.5
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 3.0e-06 55.1 86 40.7
arahy.Tifrunner.gnm1.ann1.U48W6H Arachis hypogaea HOM05D008370 ORTHO05D009732 5.1e-06 54.3 87 46.0
arahy.Tifrunner.gnm1.ann1.Z046N5 Arachis hypogaea HOM05D010746 ORTHO05D009732 5.1e-06 54.3 85 37.6
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 5.1e-06 54.3 85 43.5
Gohir.A02G136703 Gossypium hirsutum HOM05D008370 ORTHO05D009732 5.1e-06 54.3 83 47.0
Oeu028352.1 Olea europaea HOM05D008370 ORTHO05D009732 5.1e-06 54.3 84 40.5
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 6.7e-06 53.9 76 44.7
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 6.7e-06 53.9 76 44.7
FAN26G2287 Fragaria x ananassa HOM05D015647 ORTHO05D009732 6.7e-06 53.9 83 43.4
Prupe.6G166400 Prunus persica HOM05D008370 ORTHO05D009732 6.7e-06 53.9 77 40.3
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 8.7e-06 53.5 85 42.4


User provided reference genes

Program Settings