Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 3.0e-76 288.5 150 100.0
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 5.1e-44 181.4 110 90.9
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 2.5e-35 152.5 129 65.1
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 3.3e-35 152.1 105 78.1
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 4.3e-35 151.8 128 65.6
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 4.8e-34 148.3 110 73.6
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 6.2e-34 147.9 110 73.6
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 2.4e-33 146.0 110 70.0
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 6.9e-33 144.4 113 72.6
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 6.9e-33 144.4 126 65.1
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 9.0e-33 144.1 109 72.5
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.2e-32 143.7 113 71.7
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 1.2e-32 143.7 122 66.4
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 3.4e-32 142.1 110 74.5
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 1.3e-31 140.2 110 70.9
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 1.3e-31 140.2 110 70.9
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 1.7e-31 139.8 108 70.4
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 2.9e-31 139.0 109 70.6
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 3.8e-31 138.7 104 75.0
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 3.8e-31 138.7 102 76.5
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 3.8e-31 138.7 110 70.9
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 1.9e-30 136.3 108 68.5
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 1.9e-30 136.3 111 71.2
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.4e-30 136.0 113 69.9
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 1.2e-29 133.7 110 69.1
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 1.2e-29 133.7 110 66.4
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 1.6e-29 133.3 107 70.1
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 2.1e-29 132.9 111 68.5
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 2.7e-29 132.5 105 71.4
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 3.5e-29 132.1 110 65.5
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 1.3e-28 130.2 118 63.6
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 1.8e-28 129.8 110 66.4
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 1.8e-28 129.8 106 67.0
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 2.3e-28 129.4 80 83.8
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 2.3e-28 129.4 108 65.7
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 3.0e-28 129.0 109 63.3
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 5.1e-28 128.3 110 68.2
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 5.1e-28 128.3 102 70.6
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 6.7e-28 127.9 110 64.5
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 1.1e-27 127.1 107 67.3
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 1.1e-27 127.1 107 67.3
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 1.1e-27 127.1 110 62.7
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 1.1e-27 127.1 107 68.2
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 1.9e-27 126.3 108 63.0
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 1.9e-27 126.3 110 62.7
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 2.5e-27 125.9 104 63.5
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 3.3e-27 125.6 110 63.6
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 3.3e-27 125.6 99 65.7
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 4.3e-27 125.2 110 66.4
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 5.6e-27 124.8 110 60.0
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 5.6e-27 124.8 104 68.3
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 5.6e-27 124.8 111 65.8
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 7.4e-27 124.4 102 69.6
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 1.6e-26 123.2 102 62.7
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 1.6e-26 123.2 109 62.4
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 2.8e-26 122.5 104 61.5
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 4.8e-26 121.7 110 64.5
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 6.2e-26 121.3 108 61.1
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 2.4e-25 119.4 110 60.9
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 2.4e-25 119.4 105 64.8
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 2.4e-25 119.4 103 67.0
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 3.1e-25 119.0 108 60.2
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 4.0e-25 118.6 110 60.9
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 4.0e-25 118.6 93 67.7
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 2.6e-24 115.9 110 59.1
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 5.8e-24 114.8 100 64.0
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 1.0e-23 114.0 104 59.6
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 1.3e-23 113.6 109 57.8
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 2.2e-23 112.8 107 60.7
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 2.9e-23 112.5 107 60.7
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 3.8e-23 112.1 105 60.0
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 4.9e-23 111.7 110 60.0
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 1.9e-22 109.8 104 57.7
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 7.1e-22 107.8 105 58.1
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 2.1e-21 106.3 108 56.5
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 2.1e-21 106.3 103 55.3
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 3.5e-21 105.5 113 54.9
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 4.6e-21 105.1 102 56.9
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 6.0e-21 104.8 113 54.9
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 6.7e-20 101.3 113 51.3
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 8.7e-20 100.9 113 52.2
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 8.7e-20 100.9 100 54.0
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 1.1e-19 100.5 94 55.3
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 1.1e-19 100.5 112 49.1
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 2.5e-19 99.4 115 50.4
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 3.3e-19 99.0 84 59.5
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 5.7e-19 98.2 113 51.3
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 7.4e-19 97.8 106 50.9
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 9.7e-19 97.4 113 50.4
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 1.3e-18 97.1 113 51.3
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 2.8e-18 95.9 113 50.4
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 6.3e-18 94.7 113 51.3
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 8.2e-18 94.4 85 57.6
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.8e-17 93.2 113 49.6
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.8e-17 93.2 113 49.6
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.8e-17 93.2 113 49.6
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 2.4e-17 92.8 113 49.6
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 2.4e-17 92.8 113 49.6
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 2.4e-17 92.8 113 49.6
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 7.6e-16 87.8 89 51.7
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 1.0e-12 77.4 94 43.6
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 9.7e-11 70.9 90 42.2
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 9.7e-11 70.9 96 45.8
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 2.8e-10 69.3 53 66.0
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 3.1e-09 65.9 70 50.0
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 3.1e-09 65.9 70 50.0


User provided reference genes

Program Settings