Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-106 389.0 204 100.0
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.1e-102 376.7 198 99.5
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.2e-75 287.0 203 79.8
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 1.1e-54 217.2 201 64.2
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.6e-35 152.9 232 46.6
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 5.3e-28 128.6 195 49.2
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-26 123.2 214 45.3
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 1.8e-23 113.6 207 44.4
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 3.3e-22 109.4 189 42.9
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 4.4e-22 109.0 203 42.9
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 9.7e-22 107.8 202 41.1
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 3.8e-18 95.9 185 37.8
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 1.9e-17 93.6 160 44.4
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 4.2e-17 92.4 196 39.3
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.7e-16 89.0 178 38.8
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.4e-15 87.4 182 42.9
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.8e-15 87.0 192 39.6
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 2.3e-15 86.7 221 36.7
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 3.0e-15 86.3 175 42.9
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 4.0e-15 85.9 163 42.9
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.5e-14 84.0 165 39.4
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.4e-14 82.4 202 34.7
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 5.7e-14 82.0 187 36.9
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 9.7e-14 81.3 180 35.0
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 6.3e-13 78.6 186 38.7
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 6.3e-13 78.6 161 42.2
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 8.2e-13 78.2 151 39.7
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 8.2e-13 78.2 140 39.3
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.1e-12 77.8 212 32.5
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.4e-12 77.4 154 39.6
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 1.8e-12 77.0 144 39.6
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 2.4e-12 76.6 149 40.3
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 7.0e-12 75.1 179 34.6
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 1.2e-11 74.3 240 32.1
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 1.6e-11 73.9 165 37.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.0e-11 73.6 174 36.2
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 2.7e-11 73.2 143 39.9
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.5e-11 72.8 190 32.6
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 3.5e-11 72.8 158 39.2
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 5.9e-11 72.0 179 32.4
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 5.9e-11 72.0 190 36.8
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.0e-10 71.2 190 32.1
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.0e-10 71.2 156 39.1
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 1.7e-10 70.5 194 33.5
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.2e-10 70.1 157 37.6
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 2.9e-10 69.7 150 40.0
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 3.8e-10 69.3 197 33.5
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 3.8e-10 69.3 163 36.2
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 5.0e-10 68.9 179 34.1
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.0e-10 68.9 144 34.7
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.0e-10 68.9 194 32.5
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 5.0e-10 68.9 132 40.9
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 8.5e-10 68.2 174 35.1
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.1e-09 67.8 197 32.5
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 1.9e-09 67.0 186 33.3
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.9e-09 67.0 146 37.0
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 1.9e-09 67.0 185 34.1
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.5e-09 66.6 197 33.0
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.5e-09 66.6 144 37.5
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 2.5e-09 66.6 195 31.3
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 4.2e-09 65.9 169 33.1
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 1.2e-08 64.3 190 33.2
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 1.6e-08 63.9 190 33.2
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 1.6e-08 63.9 136 38.2
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 1.6e-08 63.9 131 38.2
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 4.7e-08 62.4 214 30.4
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 8.0e-08 61.6 186 32.3
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.0e-07 61.2 178 33.1
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 4.0e-07 59.3 161 31.7
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 5.2e-07 58.9 144 39.6
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 5.2e-07 58.9 123 39.8
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 8.8e-07 58.2 195 29.7
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 8.8e-07 58.2 161 32.3
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.2e-06 57.8 142 36.6
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 1.5e-06 57.4 171 31.6
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 1.5e-06 57.4 192 30.7
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 2.0e-06 57.0 158 31.6
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 2.0e-06 57.0 136 37.5
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 3.4e-06 56.2 169 33.1
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.4e-06 55.8 193 30.1
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 5.7e-06 55.5 149 34.9
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 5.7e-06 55.5 156 30.1


User provided reference genes

Program Settings