Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 0.0e+00 1324.7 662 100.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.7e-156 555.4 715 49.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.3e-144 517.7 678 47.6
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 1.4e-133 481.1 685 47.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.2e-108 398.3 693 41.1
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.8e-107 393.3 675 42.2
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.7e-104 384.4 698 41.5
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.9e-91 340.5 373 52.3
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 8.4e-91 339.0 717 37.1
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.9e-87 327.8 728 37.6
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 9.6e-87 325.5 283 62.2
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 5.8e-84 316.2 707 36.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 3.2e-82 310.5 656 36.0
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.8e-80 304.7 697 35.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 4.3e-79 300.1 619 41.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 7.6e-76 289.3 721 34.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 6.5e-75 286.2 727 34.8
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-73 282.0 323 53.3
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.3e-72 278.5 673 35.2
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.9e-71 274.6 682 34.8
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 2.8e-70 270.8 745 33.3
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.8e-69 268.1 712 34.3
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.6e-68 264.2 731 32.4
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.7e-67 261.5 741 33.6
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.7e-67 261.5 737 33.2
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.5e-63 248.4 745 32.6
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.5e-63 247.7 665 34.6
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 3.7e-62 243.8 684 32.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.8e-61 241.5 708 31.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 6.9e-61 239.6 755 31.9
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.7e-59 235.0 721 33.3
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.0e-59 233.4 732 32.9
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 4.2e-58 230.3 748 32.4
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 9.4e-58 229.2 692 33.2
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.7e-57 227.6 735 31.8
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.4e-55 219.5 718 31.3
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.3e-54 218.8 745 32.1
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.8e-54 217.6 719 33.0
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-53 214.2 317 46.1
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.1e-53 214.2 743 31.2
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 8.5e-51 206.1 717 30.5
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.5e-50 205.3 749 30.2
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 9.4e-50 202.6 748 30.5
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.1e-49 201.4 681 30.0
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 8.0e-49 199.5 679 29.9
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.0e-48 199.1 676 30.0
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.4e-48 198.7 669 31.4
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 4.0e-48 197.2 790 30.1
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 6.7e-48 196.4 700 29.4
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.5e-47 195.3 699 30.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.0e-47 194.9 685 31.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 3.7e-46 190.7 676 29.4
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.4e-45 188.7 543 33.1
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.8e-45 188.3 702 30.2
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 3.1e-45 187.6 708 29.9
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 4.1e-45 187.2 712 29.5
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.6e-44 184.5 686 31.9
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.5e-44 184.1 694 29.0
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 1.0e-43 182.6 710 29.0
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 7.2e-42 176.4 686 28.1
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.1e-41 174.9 650 29.5
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 6.1e-41 173.3 723 28.8
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 8.0e-41 172.9 658 31.2
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 8.0e-41 172.9 701 27.4
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.0e-40 172.6 534 32.2
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 2.3e-40 171.4 704 27.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 3.0e-40 171.0 731 27.9
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.2e-39 169.1 704 28.4
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.0e-39 168.3 700 26.9
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 2.0e-39 168.3 695 27.9
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 3.4e-39 167.5 414 33.8
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 5.7e-39 166.8 723 28.8
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 2.4e-37 161.4 570 29.5
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.7e-35 155.2 708 27.1
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.5e-35 153.3 663 28.1
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.1e-34 152.5 696 28.6
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 5.5e-34 150.2 694 28.2
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 5.5e-34 150.2 723 27.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 2.1e-33 148.3 666 26.7
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 2.7e-33 147.9 671 27.6
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 6.1e-33 146.7 656 27.7
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 1.8e-32 145.2 686 26.1
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 5.6e-26 123.6 681 27.6
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 7.2e-26 123.2 590 26.4
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 8.0e-25 119.8 627 27.4
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.0e-24 119.4 706 26.3
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.5e-23 115.5 275 34.2
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.0e-23 115.2 719 26.6
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.7e-22 112.1 570 25.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.2e-22 111.7 675 26.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 2.0e-20 105.1 174 42.0
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.5e-18 98.2 590 24.9
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.8e-15 86.3 69 58.0
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 6.4e-14 83.6 598 26.1
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.1e-13 82.8 432 25.0
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 6.2e-09 67.0 83 48.2
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.1e-08 66.2 304 27.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.3e-06 59.3 640 23.1
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.7e-06 58.9 166 31.3
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 4.9e-06 57.4 252 27.0
TPR.G31883 Trifolium pratense HOM05D007378 ORTHO05D007577 4.9e-06 57.4 81 40.7


User provided reference genes

Program Settings