Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0244700 Rhododendron simsii HOM05D004169 ORTHO05D004942 2.9e-285 984.6 499 100.0
CSS0042982 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 3.6e-171 605.5 499 62.7
CSS0046054 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 3.6e-171 605.5 499 62.7
Actinidia37978 Actinidia chinensis HOM05D004169 ORTHO05D004942 1.8e-170 603.2 469 65.5
Actinidia22490 Actinidia chinensis HOM05D004169 ORTHO05D004942 4.4e-169 598.6 475 65.1
Actinidia22492 Actinidia chinensis HOM05D004169 ORTHO05D004942 4.4e-169 598.6 475 65.1
Actinidia15392 Actinidia chinensis HOM05D004169 ORTHO05D004942 2.7e-166 589.3 472 63.1
vmacro21702 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 6.0e-166 588.2 472 62.5
vmacro04328 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 3.9e-165 585.5 457 67.0
Manes.18G017100 Manihot esculenta HOM05D004169 ORTHO05D004942 5.6e-164 581.6 499 61.3
CANSAT35G1895 Cannabis sativa HOM05D004169 ORTHO05D004942 9.6e-164 580.9 499 60.5
CiPaw.07G153600 Carya illinoinensis HOM05D004169 ORTHO05D004942 4.8e-163 578.6 499 61.3
Lalb_Chr08g0246061 Lupinus albus HOM05D004169 ORTHO05D004942 4.8e-163 578.6 472 61.7
Cpa.g.sc140.24 Carica papaya HOM05D004169 ORTHO05D004942 8.1e-163 577.8 469 61.6
Nn5g29242 Nelumbo nucifera HOM05D004169 ORTHO05D004942 1.1e-162 577.4 466 61.8
GSVIVG01009830001 Vitis vinifera HOM05D004169 ORTHO05D004942 1.4e-162 577.0 472 62.5
Hma1.2p1_1386F.1_g279800 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 3.1e-162 575.9 470 61.9
TAR628G0735 Trochodendron aralioides HOM05D004169 ORTHO05D004942 4.0e-162 575.5 467 62.1
ClCG08G014480 Citrullus lanatus HOM05D004169 ORTHO05D004942 6.9e-162 574.7 470 61.5
FAN20G1955 Fragaria x ananassa HOM05D004169 ORTHO05D004942 6.9e-162 574.7 472 62.5
Ciclev10001334m.g Citrus clementina HOM05D004169 ORTHO05D004942 9.0e-162 574.3 499 58.7
SGA_v2.0_scaffold17G08098 Striga asiatica HOM05D004169 ORTHO05D004942 3.4e-161 572.4 499 59.7
Atru.chr13.351 Acer truncatum HOM05D004169 ORTHO05D004942 7.6e-161 571.2 469 61.2
TWI56G0721 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 3.8e-160 568.9 469 60.8
DCAR_013851 Daucus carota HOM05D004169 ORTHO05D004942 1.4e-159 567.0 499 59.1
Hma1.2p1_0773F.1_g216220 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 1.4e-159 567.0 499 61.3
Sabra02G0021500 Salix brachista HOM05D004169 ORTHO05D004942 1.4e-159 567.0 499 58.1
AUR62014419 Chenopodium quinoa HOM05D004169 ORTHO05D004942 5.4e-159 565.1 500 59.6
PGR083G1299 Punica granatum HOM05D004169 ORTHO05D004942 5.4e-159 565.1 471 61.1
Sc15g0002560 Simmondsia chinensis HOM05D004169 ORTHO05D004942 5.4e-159 565.1 474 61.6
MSTRG.1220 Avicennia marina HOM05D004169 ORTHO05D004942 7.1e-159 564.7 466 60.5
TWI12G0121 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 7.1e-159 564.7 468 60.0
Oeu030387.1 Olea europaea HOM05D004169 ORTHO05D004942 9.3e-159 564.3 499 58.9
Oeu030389.1 Olea europaea HOM05D004169 ORTHO05D004942 9.3e-159 564.3 499 58.9
MBI05_g16274_MAGBIO Magnolia biondii HOM05D004169 ORTHO05D004942 1.2e-158 563.9 501 58.7
CsaV3_2G029300 Cucumis sativus L. HOM05D004169 ORTHO05D004942 1.6e-158 563.5 469 60.6
EL10Ac1g00441 Beta vulgaris HOM05D004169 ORTHO05D004942 2.1e-158 563.1 502 59.2
Ca_02057_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 2.1e-158 563.1 471 60.7
Glyma.04G026500 Glycine max HOM05D004169 ORTHO05D004942 2.1e-158 563.1 474 60.3
Sed0010010 Sechium edule HOM05D004169 ORTHO05D004942 2.1e-158 563.1 469 60.6
ATR0149G003 Amborella trichopoda HOM05D004169 ORTHO05D004942 6.0e-158 561.6 468 60.9
Cfa013911 Carpinus fangiana HOM05D004169 ORTHO05D004942 6.0e-158 561.6 499 58.3
QL02p010782 Quercus lobata HOM05D004169 ORTHO05D004942 6.0e-158 561.6 500 60.0
Potri.002G027300 Populus trichocarpa HOM05D004169 ORTHO05D004942 7.9e-158 561.2 469 60.3
Potri.005G235200 Populus trichocarpa HOM05D004169 ORTHO05D004942 7.9e-158 561.2 499 57.9
MELO3C010990.2 Cucumis melo HOM05D004169 ORTHO05D004942 1.0e-157 560.8 466 60.1
Oeu047750.1 Olea europaea HOM05D004169 ORTHO05D004942 1.3e-157 560.5 464 61.0
Dinv39491 Davidia involucrata HOM05D004169 ORTHO05D004942 1.7e-157 560.1 500 59.0
Sabra05G0181500 Salix brachista HOM05D004169 ORTHO05D004942 1.7e-157 560.1 499 58.1
Hund26864 Selenicereus undatus HOM05D004169 ORTHO05D004942 1.7e-157 560.1 472 60.0
Medtr3g113160 Medicago truncatula HOM05D004169 ORTHO05D004942 2.3e-157 559.7 499 57.7
Migut.N03135 Erythranthe guttata HOM05D004169 ORTHO05D004942 3.0e-157 559.3 466 60.9
Eucgr.F01623 Eucalyptus grandis HOM05D004169 ORTHO05D004942 3.9e-157 558.9 466 60.5
RcHm_v2.0_Chr6g0302201 Rosa chinensis HOM05D004169 ORTHO05D004942 1.1e-156 557.4 474 61.4
AUR62019155 Chenopodium quinoa HOM05D004169 ORTHO05D004942 1.5e-156 557.0 504 59.5
Aqoxy6G02346 Aquilegia oxysepala HOM05D004169 ORTHO05D004942 1.9e-156 556.6 465 60.9
FAN15G3243 Fragaria x ananassa HOM05D004169 ORTHO05D004942 1.9e-156 556.6 504 58.5
MSTRG.24262 Avicennia marina HOM05D004169 ORTHO05D004942 1.3e-155 553.9 500 58.8
Cc10_g02050 Coffea canephora HOM05D004169 ORTHO05D004942 1.6e-155 553.5 499 59.5
THA.LOC104804855 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 1.6e-155 553.5 470 59.1
TPR.G30291 Trifolium pratense HOM05D004169 ORTHO05D004942 2.1e-155 553.1 474 60.1
Atru.chr13.350 Acer truncatum HOM05D004169 ORTHO05D004942 8.1e-155 551.2 469 58.8
CARHR231560 Cardamine hirsuta HOM05D004169 ORTHO05D004942 8.1e-155 551.2 468 60.3
MD08G1017500 Malus domestica HOM05D004169 ORTHO05D004942 8.1e-155 551.2 501 57.5
A01p15480 Brassica napus HOM05D004169 ORTHO05D004942 1.1e-154 550.8 501 59.7
Lalb_Chr22g0354451 Lupinus albus HOM05D004169 ORTHO05D004942 1.1e-154 550.8 472 59.3
BraA01t01487Z Brassica rapa HOM05D004169 ORTHO05D004942 1.4e-154 550.4 498 59.4
FvH4_2g39100 Fragaria vesca HOM05D004169 ORTHO05D004942 1.8e-154 550.1 504 57.5
Duzib116G0263 Durio zibethinus HOM05D004169 ORTHO05D004942 2.4e-154 549.7 473 59.4
Duzib093G0775 Durio zibethinus HOM05D004169 ORTHO05D004942 5.3e-154 548.5 470 60.0
Ah.05g171900 Amaranthus hybridus HOM05D004169 ORTHO05D004942 9.0e-154 547.7 500 58.8
Prupe.1G370200 Prunus persica HOM05D004169 ORTHO05D004942 1.2e-153 547.4 474 59.1
VMungo1309G1829 Vigna mungo HOM05D004169 ORTHO05D004942 1.2e-153 547.4 473 59.8
THA.LOC104806900 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 1.5e-153 547.0 473 59.8
Os09g0520200 Oryza sativa ssp. japonica HOM05D004169 ORTHO05D004942 2.0e-153 546.6 464 60.1
Sp7g22120 Schrenkiella parvula HOM05D004169 ORTHO05D004942 2.0e-153 546.6 467 59.7
Thecc.08G038200 Theobroma cacao HOM05D004169 ORTHO05D004942 2.0e-153 546.6 473 59.2
Glyma.14G216800 Glycine max HOM05D004169 ORTHO05D004942 2.6e-153 546.2 469 59.7
BcaC09g50903 Brassica carinata HOM05D004169 ORTHO05D004942 3.4e-153 545.8 495 59.0
Medtr1g023340 Medicago truncatula HOM05D004169 ORTHO05D004942 3.4e-153 545.8 472 59.3
TAR376G0386 Trochodendron aralioides HOM05D004169 ORTHO05D004942 3.4e-153 545.8 465 60.0
Migut.C00795 Erythranthe guttata HOM05D004169 ORTHO05D004942 4.5e-153 545.4 499 56.9
C01p19380 Brassica napus HOM05D004169 ORTHO05D004942 9.9e-153 544.3 466 59.4
Thhalv10025308m.g Eutrema salsugineum HOM05D004169 ORTHO05D004942 9.9e-153 544.3 467 59.3
VMungo0647G1986 Vigna mungo HOM05D004169 ORTHO05D004942 9.9e-153 544.3 474 58.9
HanXRQChr05g0156291 Helianthus annuus HOM05D004169 ORTHO05D004942 1.3e-152 543.9 499 57.7
Phvul.001G009400 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 1.7e-152 543.5 469 58.8
AL7G29130 Arabidopsis lyrata HOM05D004169 ORTHO05D004942 2.2e-152 543.1 466 59.7
Haze_22591 Corylus avellana HOM05D004169 ORTHO05D004942 2.2e-152 543.1 523 55.6
BolC1t01866H Brassica oleracea HOM05D004169 ORTHO05D004942 2.9e-152 542.7 466 59.2
Lj5g0006972 Lotus japonicus HOM05D004169 ORTHO05D004942 2.9e-152 542.7 474 59.5
A03p55080 Brassica napus HOM05D004169 ORTHO05D004942 4.9e-152 542.0 501 58.1
BraA03t14568Z Brassica rapa HOM05D004169 ORTHO05D004942 4.9e-152 542.0 501 58.1
Ca_13394_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 4.9e-152 542.0 474 58.4
arahy.Tifrunner.gnm1.ann1.T5GNGC Arachis hypogaea HOM05D004169 ORTHO05D004942 8.4e-152 541.2 474 58.2
arahy.Tifrunner.gnm1.ann1.CMA0H9 Arachis hypogaea HOM05D004169 ORTHO05D004942 1.1e-151 540.8 504 55.6
arahy.Tifrunner.gnm1.ann1.SD0DCP Arachis hypogaea HOM05D004169 ORTHO05D004942 1.1e-151 540.8 499 56.5
Sopen07g015700 Solanum pennellii HOM05D004169 ORTHO05D004942 1.4e-151 540.4 463 59.2
Glyma.17G255400 Glycine max HOM05D004169 ORTHO05D004942 1.9e-151 540.0 469 58.8
Nitab4.5_0000352g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 2.4e-151 539.7 460 58.9
Psat6g005200 Pisum sativum HOM05D004169 ORTHO05D004942 3.2e-151 539.3 463 59.2
Lj1g0021833 Lotus japonicus HOM05D004169 ORTHO05D004942 4.2e-151 538.9 472 57.6
C07p53400 Brassica napus HOM05D004169 ORTHO05D004942 9.3e-151 537.7 501 57.7
MD15G1016400 Malus domestica HOM05D004169 ORTHO05D004942 1.2e-150 537.3 496 56.9
BolC7t45834H Brassica oleracea HOM05D004169 ORTHO05D004942 2.1e-150 536.6 501 57.5
ECA246G0823 Erigeron canadensis HOM05D004169 ORTHO05D004942 3.5e-150 535.8 499 56.3
TPR.G34338 Trifolium pratense HOM05D004169 ORTHO05D004942 3.5e-150 535.8 471 58.2
AT4G24160 Arabidopsis thaliana HOM05D004169 ORTHO05D004942 4.6e-150 535.4 454 60.1
Peaxi162Scf00186g00012 Petunia axillaris HOM05D004169 ORTHO05D004942 4.6e-150 535.4 464 58.8
Phvul.009G014600 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 4.6e-150 535.4 463 59.0
HanXRQChr09g0269701 Helianthus annuus HOM05D004169 ORTHO05D004942 7.9e-150 534.6 497 56.1
HPP92_014629 Vanilla planifolia HOM05D004169 ORTHO05D004942 7.9e-150 534.6 466 57.5
arahy.Tifrunner.gnm1.ann1.3VK2QG Arachis hypogaea HOM05D004169 ORTHO05D004942 1.0e-149 534.3 517 54.0
unitig_37.g13009 Utricularia gibba HOM05D004169 ORTHO05D004942 1.8e-149 533.5 474 58.0
PSO541G3059 Papaver somniferum HOM05D004169 ORTHO05D004942 2.3e-149 533.1 470 58.9
Aa31sc185G60 Aethionema arabicum HOM05D004169 ORTHO05D004942 3.0e-149 532.7 500 56.0
Carub.0007s1694 Capsella rubella HOM05D004169 ORTHO05D004942 3.9e-149 532.3 467 58.2
PSO675G0784 Papaver somniferum HOM05D004169 ORTHO05D004942 3.9e-149 532.3 470 59.1
Gohir.A05G188120 Gossypium hirsutum HOM05D004169 ORTHO05D004942 1.9e-148 530.0 470 59.1
Zm00001eb102970 Zea mays HOM05D004169 ORTHO05D004942 1.9e-148 530.0 465 58.3
Gorai.009G196500 Gossypium raimondii HOM05D004169 ORTHO05D004942 2.5e-148 529.6 470 58.9
Lsat_1_v5_gn_5_26101 Lactuca sativa HOM05D004169 ORTHO05D004942 2.5e-148 529.6 460 58.0
Hund17227 Selenicereus undatus HOM05D004169 ORTHO05D004942 7.4e-148 528.1 466 56.7
Lj4C791T8 Lonicera japonica HOM05D004169 ORTHO05D004942 3.7e-147 525.8 423 61.9
ECA232G2227 Erigeron canadensis HOM05D004169 ORTHO05D004942 2.0e-145 520.0 483 55.7
DCAR_009941 Daucus carota HOM05D004169 ORTHO05D004942 2.6e-145 519.6 470 56.6
Sc26g0003230 Simmondsia chinensis HOM05D004169 ORTHO05D004942 3.4e-145 519.2 458 58.5
Rhsim06G0026100 Rhododendron simsii HOM05D004169 ORTHO05D004942 4.9e-144 515.4 423 61.2
Nitab4.5_0004368g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 8.4e-144 514.6 463 57.9
unitig_8.g3381 Utricularia gibba HOM05D004169 ORTHO05D004942 1.1e-143 514.2 467 57.2
Lsat_1_v5_gn_4_116000 Lactuca sativa HOM05D004169 ORTHO05D004942 2.5e-143 513.1 457 56.2
CAN.G541.46 Capsicum annuum HOM05D004169 ORTHO05D004942 1.2e-142 510.8 463 56.8
Dinv31815 Davidia involucrata HOM05D004169 ORTHO05D004942 6.0e-142 508.4 421 60.6
BcaNung06401 Brassica carinata HOM05D004169 ORTHO05D004942 1.3e-133 480.7 491 53.8
SMO266G0010 Selaginella moellendorffii HOM05D004169 ORTHO05D004942 3.1e-130 469.5 459 52.9
AagrBONN_evm.TU.Sc2ySwM_362.1142 Anthoceros agrestis HOM05D004169 ORTHO05D004942 1.4e-127 460.7 463 50.8
SalBow7G3670 Salvia bowleyana HOM05D004169 ORTHO05D004942 1.8e-122 443.7 362 61.6
Mapoly0037s0009 Marchantia polymorpha HOM05D004169 ORTHO05D004942 4.2e-119 432.6 466 49.8
MD00G1162000 Malus domestica HOM05D004169 ORTHO05D004942 1.6e-118 430.6 432 54.2
Psat5g014480 Pisum sativum HOM05D004169 ORTHO05D004942 3.0e-117 426.4 403 55.8
Pp3c9_570 Physcomitrium patens HOM05D004169 ORTHO05D004942 2.0e-116 423.7 462 48.7
Sed0000348 Sechium edule HOM05D004169 ORTHO05D004942 2.5e-111 406.8 360 57.5
SGA_v2.0_scaffold92G28285 Striga asiatica HOM05D004169 ORTHO05D004942 1.8e-109 400.6 415 52.5
BcaNung01121 Brassica carinata HOM05D004169 ORTHO05D004942 2.6e-105 386.7 297 63.3
Gohir.D05G191200 Gossypium hirsutum HOM05D004169 ORTHO05D004942 6.5e-104 382.1 310 62.3
COL.COLO4_26191 Corchorus olitorius HOM05D004169 ORTHO05D004942 5.9e-89 332.4 470 42.8
Glyma.06G026500 Glycine max HOM05D004169 ORTHO05D004942 4.3e-87 326.2 237 65.8
CBR_g53937 Chara braunii HOM05D004169 ORTHO05D004942 8.0e-86 322.0 447 40.0
Gorai.009G270900 Gossypium raimondii HOM05D004169 ORTHO05D004942 4.9e-83 312.8 500 39.4
SEGI_38743 Sequoiadendron giganteum HOM05D004169 ORTHO05D004942 6.6e-80 302.4 257 55.6
Gohir.D05G259151 Gossypium hirsutum HOM05D004169 ORTHO05D004942 8.3e-75 285.4 488 38.1
Solyc07g032180.3 Solanum lycopersicum HOM05D004169 ORTHO05D004942 5.4e-66 256.1 227 55.1
Solyc07g032170.3 Solanum lycopersicum HOM05D004169 ORTHO05D004942 2.2e-51 207.6 184 59.8
Cre01.g000300 Chlamydomonas reinhardtii HOM05D004169 ORTHO05D004942 3.9e-48 196.8 422 32.0
DCAR_009944 Daucus carota HOM05D004169 ORTHO05D004942 4.3e-47 193.4 177 53.1
SEGI_29088 Sequoiadendron giganteum HOM05D004169 ORTHO05D004942 2.7e-41 174.1 161 59.6
Lsat_1_v5_gn_9_64701 Lactuca sativa HOM05D004169 ORTHO05D004942 2.7e-33 147.5 89 73.0
Cfa027320 Carpinus fangiana HOM05D004169 ORTHO05D004942 7.9e-33 146.0 418 27.0
CARHR269140 Cardamine hirsuta HOM05D004169 ORTHO05D004942 4.8e-30 136.7 85 68.2
SHI08091 Sapria himalayana HOM05D004169 ORTHO05D004942 3.9e-24 117.1 79 68.4
Haze_22590 Corylus avellana HOM05D004169 ORTHO05D002838 9.6e-23 112.5 60 78.3
PRCOL_00002006 Prasinoderma coloniale HOM05D004169 ORTHO05D004942 1.6e-22 111.7 376 26.3
TPR.G34370 Trifolium pratense HOM05D004169 ORTHO05D004942 2.9e-19 100.9 93 54.8
MCO08G266 Micromonas commoda HOM05D004169 ORTHO05D004942 2.4e-13 81.3 370 23.0
CARHR269150 Cardamine hirsuta HOM05D004169 ORTHO05D004942 1.4e-10 72.0 52 65.4
Lsat_1_v5_gn_3_21400 Lactuca sativa HOM05D004169 ORTHO05D004942 2.6e-07 61.2 44 63.6
COL.COLO4_27227 Corchorus olitorius HOM05D004169 ORTHO05D004942 2.8e-06 57.8 32 81.2


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