Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0243500 Rhododendron simsii HOM05D004641 ORTHO05D005871 1.2e-194 682.9 342 100.0
vmacro04307 Vaccinium macrocarpon HOM05D004641 ORTHO05D005871 1.9e-118 429.9 236 91.5
CSS0000565 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 6.4e-111 404.8 237 86.9
CSS0029182 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 1.1e-110 404.1 237 86.5
Actinidia04038 Actinidia chinensis HOM05D004641 ORTHO05D005871 4.6e-109 398.7 231 87.0
GSVIVG01020002001 Vitis vinifera HOM05D004641 ORTHO05D005871 9.0e-105 384.4 230 83.0
Manes.01G186500 Manihot esculenta HOM05D004641 ORTHO05D005871 1.5e-104 383.6 233 78.5
TWI12G0809 Tripterygium wilfordii HOM05D004641 ORTHO05D005871 1.4e-102 377.1 229 79.0
Gorai.013G084700 Gossypium raimondii HOM05D004641 ORTHO05D005871 7.1e-102 374.8 230 78.7
Gohir.A13G074000 Gossypium hirsutum HOM05D004641 ORTHO05D005871 3.5e-101 372.5 230 78.3
Cpa.g.sc128.14 Carica papaya HOM05D004641 ORTHO05D005871 7.9e-101 371.3 229 77.7
PGR102G3009 Punica granatum HOM05D004641 ORTHO05D005871 1.0e-100 370.9 237 75.1
TAR629G2466 Trochodendron aralioides HOM05D004641 ORTHO05D005871 1.0e-100 370.9 230 80.9
Peaxi162Scf00541g00527 Petunia axillaris HOM05D004641 ORTHO05D005871 1.3e-100 370.5 226 80.1
CANSAT64G1560 Cannabis sativa HOM05D004641 ORTHO05D005871 1.8e-100 370.2 225 80.4
Gohir.D13G074100 Gossypium hirsutum HOM05D004641 ORTHO05D005871 2.3e-100 369.8 230 77.8
Lj3A1038G72 Lonicera japonica HOM05D004641 ORTHO05D005871 2.3e-100 369.8 229 79.9
PGSC0003DMG400003384 Solanum tuberosum HOM05D004641 ORTHO05D005871 3.0e-100 369.4 226 79.6
Solyc05g007450.3 Solanum lycopersicum HOM05D004641 ORTHO05D005871 3.9e-100 369.0 226 79.2
Thecc.02G351000 Theobroma cacao HOM05D004641 ORTHO05D005871 5.1e-100 368.6 230 77.0
Prupe.1G273100 Prunus persica HOM05D004641 ORTHO05D005871 6.7e-100 368.2 229 77.7
Nitab4.5_0000703g0120 Nicotiana tabacum HOM05D004641 ORTHO05D005871 8.7e-100 367.9 226 79.2
CiPaw.06G083900 Carya illinoinensis HOM05D004641 ORTHO05D005871 1.5e-99 367.1 229 76.9
Sopen05g003330 Solanum pennellii HOM05D004641 ORTHO05D005871 1.5e-99 367.1 226 79.2
TAR622G0412 Trochodendron aralioides HOM05D004641 ORTHO05D005871 1.5e-99 367.1 230 79.1
SalBow2G2171 Salvia bowleyana HOM05D004641 ORTHO05D005871 2.5e-99 366.3 240 75.4
Potri.011G083700 Populus trichocarpa HOM05D004641 ORTHO05D005871 3.3e-99 365.9 229 76.9
Ciclev10032310m.g Citrus clementina HOM05D004641 ORTHO05D005871 4.3e-99 365.5 229 75.5
Duzib268G0036 Durio zibethinus HOM05D004641 ORTHO05D005871 5.7e-99 365.2 230 76.1
MSTRG.7808 Avicennia marina HOM05D004641 ORTHO05D005871 1.3e-98 364.0 232 77.2
RcHm_v2.0_Chr4g0439951 Rosa chinensis HOM05D004641 ORTHO05D005871 1.6e-98 363.6 229 77.7
CiPaw.05G136500 Carya illinoinensis HOM05D004641 ORTHO05D005871 3.7e-98 362.5 229 76.0
COL.COLO4_22996 Corchorus olitorius HOM05D004641 ORTHO05D005871 3.7e-98 362.5 230 76.5
Oeu001572.1 Olea europaea HOM05D004641 ORTHO05D005871 3.7e-98 362.5 232 74.6
QL03p064370 Quercus lobata HOM05D004641 ORTHO05D005871 3.7e-98 362.5 229 78.2
FvH4_4g31460 Fragaria vesca HOM05D004641 ORTHO05D005871 6.3e-98 361.7 229 76.4
MD13G1073100 Malus domestica HOM05D004641 ORTHO05D005871 6.3e-98 361.7 229 76.9
CAN.G58.35 Capsicum annuum HOM05D004641 ORTHO05D005871 1.1e-97 360.9 222 77.9
Cc11_g13100 Coffea canephora HOM05D004641 ORTHO05D005871 1.4e-97 360.5 232 75.0
FAN22G2174 Fragaria x ananassa HOM05D004641 ORTHO05D005871 1.8e-97 360.1 229 76.4
Eucgr.B03435 Eucalyptus grandis HOM05D004641 ORTHO05D005871 4.1e-97 359.0 237 73.8
Nn3g17219 Nelumbo nucifera HOM05D004641 ORTHO05D005871 6.9e-97 358.2 230 77.0
Glyma.02G106600 Glycine max HOM05D004641 ORTHO05D005871 4.5e-96 355.5 229 74.2
VMungo1215G3365 Vigna mungo HOM05D004641 ORTHO05D005871 4.5e-96 355.5 237 72.6
Ca_24263_v3 Cicer arietinum L. HOM05D004641 ORTHO05D005871 5.9e-96 355.1 229 75.1
Lalb_Chr10g0098211 Lupinus albus HOM05D004641 ORTHO05D005871 5.9e-96 355.1 229 76.9
Atru.chr11.1801 Acer truncatum HOM05D004641 ORTHO05D005871 7.6e-96 354.8 217 76.5
Phvul.002G086150 Phaseolus vulgaris HOM05D004641 ORTHO05D005871 7.6e-96 354.8 229 74.2
THA.LOC104822117 Tarenaya hassleriana HOM05D004641 ORTHO05D005871 1.0e-95 354.4 229 73.4
Migut.L01304 Erythranthe guttata HOM05D004641 ORTHO05D005871 2.2e-95 353.2 234 72.2
AUR62005767 Chenopodium quinoa HOM05D004641 ORTHO05D005871 3.8e-95 352.4 229 73.8
HanXRQChr12g0362561 Helianthus annuus HOM05D004641 ORTHO05D005871 3.8e-95 352.4 229 75.5
Psat2g121160 Pisum sativum HOM05D004641 ORTHO05D005871 3.8e-95 352.4 229 74.7
Aqoxy3G03361 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 5.0e-95 352.1 270 66.3
MBI05_g35443_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 6.5e-95 351.7 236 73.3
AUR62028790 Chenopodium quinoa HOM05D004641 ORTHO05D005871 1.9e-94 350.1 229 73.4
FAN07G1510 Fragaria x ananassa HOM05D004641 ORTHO05D005871 2.5e-94 349.7 239 72.4
FAN12G2116 Fragaria x ananassa HOM05D001668 ORTHO05D005871 3.2e-94 349.4 239 72.4
Medtr5g040250 Medicago truncatula HOM05D004641 ORTHO05D005871 4.2e-94 349.0 229 72.9
Sc11g0001860 Simmondsia chinensis HOM05D004641 ORTHO05D005871 5.5e-94 348.6 225 74.2
Medtr7g039370 Medicago truncatula HOM05D004641 ORTHO05D005871 7.2e-94 348.2 229 72.9
Aa31LG7G8260 Aethionema arabicum HOM05D004641 ORTHO05D005871 9.3e-94 347.8 226 73.5
Glyma.01G046400 Glycine max HOM05D004641 ORTHO05D005871 1.2e-93 347.4 229 72.5
DCAR_007149 Daucus carota HOM05D004641 ORTHO05D005871 2.7e-93 346.3 231 74.9
Hund25250 Selenicereus undatus HOM05D004641 ORTHO05D005871 2.7e-93 346.3 229 72.5
FAN17G1817 Fragaria x ananassa HOM05D004641 ORTHO05D005871 3.6e-93 345.9 239 72.0
Lj2g0007835 Lotus japonicus HOM05D004641 ORTHO05D005871 3.6e-93 345.9 229 73.4
Sabra11G0066400 Salix brachista HOM05D004641 ORTHO05D005871 4.6e-93 345.5 229 74.7
PSO017G4882 Papaver somniferum HOM05D004641 ORTHO05D005871 3.0e-92 342.8 230 72.6
PSO478G0089 Papaver somniferum HOM05D004641 ORTHO05D005871 3.0e-92 342.8 230 72.6
CARHR025060 Cardamine hirsuta HOM05D004641 ORTHO05D005871 3.9e-92 342.4 226 74.3
MELO3C008530.2 Cucumis melo HOM05D004641 ORTHO05D005871 3.9e-92 342.4 229 74.2
ECA233G1872 Erigeron canadensis HOM05D004641 ORTHO05D005871 3.9e-92 342.4 229 73.8
Lalb_Chr17g0340601 Lupinus albus HOM05D004641 ORTHO05D005871 6.7e-92 341.7 229 74.7
HanXRQChr08g0210501 Helianthus annuus HOM05D004641 ORTHO05D005871 2.5e-91 339.7 232 73.3
ClCG11G009310 Citrullus lanatus HOM05D004641 ORTHO05D005871 3.3e-91 339.3 229 71.6
Psat0s2466g0040 Pisum sativum HOM05D004641 ORTHO05D005871 4.3e-91 339.0 231 70.6
AL1G38720 Arabidopsis lyrata HOM05D004641 ORTHO05D005871 5.7e-91 338.6 226 72.6
Nitab4.5_0012364g0020 Nicotiana tabacum HOM05D004641 ORTHO05D005871 7.4e-91 338.2 222 75.2
EL10Ac6g13193 Beta vulgaris HOM05D004641 ORTHO05D005871 9.7e-91 337.8 263 64.3
CsaV3_2G010800 Cucumis sativus L. HOM05D004641 ORTHO05D005871 9.7e-91 337.8 229 71.6
Carub.0001s2410 Capsella rubella HOM05D004641 ORTHO05D005871 2.2e-90 336.7 226 72.6
BcaC05g26381 Brassica carinata HOM05D004641 ORTHO05D005871 3.7e-90 335.9 226 72.1
C05p24110 Brassica napus HOM05D004641 ORTHO05D005871 3.7e-90 335.9 226 72.1
BolC5t31146H Brassica oleracea HOM05D004641 ORTHO05D005871 3.7e-90 335.9 226 72.1
Aqoxy5G03781 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 6.3e-90 335.1 230 71.7
AT1G26840 Arabidopsis thaliana HOM05D004641 ORTHO05D005871 6.3e-90 335.1 226 71.7
A09p40260 Brassica napus HOM05D004641 ORTHO05D005871 8.2e-90 334.7 226 71.7
BraA09t39524Z Brassica rapa HOM05D004641 ORTHO05D005871 8.2e-90 334.7 226 72.1
Thhalv10008398m.g Eutrema salsugineum HOM05D004641 ORTHO05D005871 8.2e-90 334.7 226 71.7
Zm00001eb328260 Zea mays HOM05D004641 ORTHO05D005871 8.2e-90 334.7 221 71.0
BcaC07g39267 Brassica carinata HOM05D004641 ORTHO05D005871 4.1e-89 332.4 226 71.7
C08p22760 Brassica napus HOM05D004641 ORTHO05D005871 4.1e-89 332.4 226 71.7
BolC8t49912H Brassica oleracea HOM05D004641 ORTHO05D005871 4.1e-89 332.4 226 71.7
Sp1g21940 Schrenkiella parvula HOM05D004641 ORTHO05D005871 4.1e-89 332.4 226 71.2
Os07g0628600 Oryza sativa ssp. japonica HOM05D004641 ORTHO05D005871 6.9e-89 331.6 230 68.3
A08p27580 Brassica napus HOM05D004641 ORTHO05D005871 1.5e-88 330.5 226 71.2
BraA08t34696Z Brassica rapa HOM05D004641 ORTHO05D005871 1.5e-88 330.5 226 71.2
SGA_v2.0_scaffold302G47825 Striga asiatica HOM05D004641 ORTHO05D005871 2.6e-88 329.7 228 73.2
BcaB03g12011 Brassica carinata HOM05D004641 ORTHO05D005871 5.9e-88 328.6 226 70.8
Ah.03g135170 Amaranthus hybridus HOM05D004641 ORTHO05D005871 1.3e-87 327.4 205 74.6
Sed0002473 Sechium edule HOM05D004641 ORTHO05D005871 1.9e-86 323.6 229 69.0
MD16G1074100 Malus domestica HOM05D004641 ORTHO05D005871 9.4e-86 321.2 245 66.5
ATR0800G170 Amborella trichopoda HOM05D004641 ORTHO05D005871 3.6e-85 319.3 229 68.1
Sed0021592 Sechium edule HOM05D004641 ORTHO05D005871 1.0e-84 317.8 229 70.7
SGA_v2.0_scaffold53G19380 Striga asiatica HOM05D004641 ORTHO05D005871 1.8e-84 317.0 226 69.9
Oeu054890.1 Olea europaea HOM05D004641 ORTHO05D005871 2.3e-84 316.6 229 69.0
HPP92_016908 Vanilla planifolia HOM05D004641 ORTHO05D005871 3.0e-84 316.2 219 70.3
Haze_12020 Corylus avellana HOM05D004641 ORTHO05D005871 8.8e-84 314.7 229 69.9
Oeu054889.1 Olea europaea HOM05D004641 ORTHO05D005871 8.8e-84 314.7 229 68.6
Sp5g24800 Schrenkiella parvula HOM05D004641 ORTHO05D005871 4.4e-83 312.4 255 62.0
arahy.Tifrunner.gnm1.ann1.K7EFN7 Arachis hypogaea HOM05D004641 ORTHO05D005871 7.4e-83 311.6 208 71.6
CARHR062650 Cardamine hirsuta HOM05D004641 ORTHO05D005871 7.4e-83 311.6 226 69.0
arahy.Tifrunner.gnm1.ann1.ITG5Q4 Arachis hypogaea HOM05D004641 ORTHO05D005871 6.9e-81 305.1 230 66.1
SEGI_09090 Sequoiadendron giganteum HOM05D004641 ORTHO05D005871 6.5e-79 298.5 244 61.1
SHI55061 Sapria himalayana HOM05D004641 ORTHO05D005871 2.8e-74 283.1 214 62.1
CDE04G3358 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 3.7e-74 282.7 220 65.0
Lsat_1_v5_gn_8_52860 Lactuca sativa HOM05D004641 ORTHO05D005871 4.1e-73 279.3 232 62.9
Dinv16637 Davidia involucrata HOM05D004641 ORTHO05D005871 3.5e-72 276.2 166 81.3
AagrBONN_evm.TU.Sc2ySwM_228.4149 Anthoceros agrestis HOM05D004641 ORTHO05D005871 1.9e-70 270.4 229 55.0
Pp3c13_2030 Physcomitrium patens HOM05D004641 ORTHO05D005871 4.1e-65 252.7 232 52.6
Mapoly0064s0110 Marchantia polymorpha HOM05D004641 ORTHO05D005871 5.9e-64 248.8 216 56.9
MBI09_g01021_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 2.9e-63 246.5 214 62.1
Gohir.A01G134350 Gossypium hirsutum HOM05D004641 ORTHO05D005871 7.5e-59 231.9 151 72.2
SMO114G0050 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 4.8e-58 229.2 197 52.8
SMO117G0352 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.8e-57 227.3 197 52.8
unitig_22.g6910 Utricularia gibba HOM05D004641 ORTHO05D005871 4.1e-57 226.1 230 56.5
Gohir.A07G052500 Gossypium hirsutum HOM05D004641 ORTHO05D005871 5.4e-57 225.7 139 76.3
SMO254G0007 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 5.4e-57 225.7 197 51.8
SMO254G0005 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.2e-56 224.6 197 51.8
MBI02_g14195_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 2.3e-55 220.3 215 57.7
MBI05_g01300_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 7.2e-54 215.3 228 54.4
SMO254G0008 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 3.3e-46 189.9 197 45.7
MBI10_g44256_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.0e-44 184.9 177 60.5
Gohir.A08G223448 Gossypium hirsutum HOM05D004641 ORTHO05D005871 4.4e-43 179.5 105 79.0
CDE08G0800 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 2.3e-39 167.2 188 51.1
CBR_g31088 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-37 159.1 138 55.1
Thecc.03G087000 Theobroma cacao HOM05D004641 ORTHO05D005871 9.2e-33 145.2 118 64.4
MBI10_g06043_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 2.5e-30 137.1 206 44.7
MD16G1073900 Malus domestica HOM05D004641 ORTHO05D005871 2.5e-30 137.1 83 79.5
SMO254G0011 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 3.6e-29 133.3 182 39.0
TPR.G37129 Trifolium pratense HOM05D004641 ORTHO05D005871 4.7e-29 132.9 76 81.6
MBI10_g47167_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 2.3e-28 130.6 224 41.5
Cre06.g285650 Chlamydomonas reinhardtii HOM05D004641 ORTHO05D005871 5.2e-28 129.4 190 42.6
SMO254G0019 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 7.5e-27 125.6 199 36.2
PRCOL_00006308 Prasinoderma coloniale HOM05D004641 ORTHO05D005871 9.9e-27 125.2 218 35.3
C05p19510 Brassica napus HOM05D004641 ORTHO05D005871 3.7e-26 123.2 104 62.5
BolC5t30653H Brassica oleracea HOM05D004641 ORTHO05D005871 3.7e-26 123.2 104 62.5
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 4.4e-19 99.8 62 75.8
MBI14_g27757_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.7e-18 97.8 61 73.8
MBI18_g33078_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 6.4e-18 95.9 60 73.3
MBI11_g16036_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.9e-17 94.4 61 72.1
CBR_g31090 Chara braunii HOM05D004641 ORTHO05D005871 5.4e-17 92.8 91 50.5
MBI16_g45579_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 2.3e-15 87.4 67 65.7
MBI13_g16082_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.6e-13 81.3 54 72.2
A10p02040 Brassica napus HOM05D000207 ORTHO05D013918 8.1e-13 79.0 51 68.6
A02p16560 Brassica napus HOM05D004641 ORTHO05D005871 3.2e-09 67.0 92 41.3
EL10Ac2g04116 Beta vulgaris HOM05D004641 ORTHO05D005871 3.0e-07 60.5 46 60.9


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