Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0240000 Rhododendron simsii HOM05D013052 ORTHO05D012831 7.0e-248 860.1 427 100.0
Rhsim07G0240100 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.0e-68 265.0 433 41.8
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 8.5e-52 208.8 458 35.8
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.9e-51 207.6 458 35.8
Rhsim01G0094200 Rhododendron simsii HOM05D013052 ORTHO05D012831 6.5e-44 182.6 448 33.9
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 9.4e-43 178.7 512 31.2
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 1.0e-36 158.7 444 34.5
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 2.5e-35 154.1 427 34.7
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 4.1e-30 136.7 434 32.5
CSS0016779 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.2e-29 135.2 240 35.8
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 6.5e-28 129.4 258 36.0
QL11p055992 Quercus lobata HOM05D013052 ORTHO05D012831 1.5e-27 128.3 414 30.0
CSS0002818 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.1e-22 110.2 233 35.6
CSS0045488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.1e-22 110.2 239 33.9
Rhsim11G0021200 Rhododendron simsii HOM05D013052 ORTHO05D000007 2.5e-19 100.9 136 40.4
CSS0022832 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 8.3e-15 85.9 232 32.8
Rhsim07G0174600 Rhododendron simsii HOM05D018855 ORTHO05D012831 4.2e-11 73.6 97 46.4
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.2e-10 72.0 211 29.9
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 1.6e-10 71.6 265 27.5
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.5e-08 65.1 264 28.0
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.5e-08 65.1 217 27.2
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 5.7e-08 63.2 265 28.3
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 1.8e-06 58.2 274 26.3


User provided reference genes

Program Settings