Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 8.4e-193 676.8 327 100.0
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-179 632.5 327 93.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-160 569.7 324 84.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.2e-160 568.5 325 84.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.4e-155 553.1 326 80.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.2e-152 541.6 324 81.2
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-151 540.0 318 82.1
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-150 536.2 324 79.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.5e-146 521.5 323 77.7
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 5.9e-146 521.2 326 75.2
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 5.9e-146 521.2 326 77.0
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 7.7e-146 520.8 327 75.5
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.3e-145 520.0 323 75.5
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.0e-145 518.1 326 75.2
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-144 516.5 324 77.5
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 9.4e-144 513.8 321 75.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 9.4e-144 513.8 322 76.1
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.0e-142 510.4 325 74.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.0e-142 508.8 333 73.0
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 5.2e-142 508.1 326 73.3
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.0e-141 506.1 333 72.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 9.7e-141 503.8 323 73.4
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.3e-140 503.4 326 72.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.8e-140 502.3 323 73.1
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.3e-140 501.1 323 72.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.8e-139 499.6 326 71.5
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.1e-139 498.8 323 72.4
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.1e-139 498.4 323 73.1
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.5e-138 495.4 323 74.0
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 4.5e-138 495.0 323 72.1
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.9e-138 494.6 324 72.8
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.3e-137 493.4 323 71.8
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.7e-137 493.0 323 73.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.7e-137 493.0 323 73.1
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.9e-137 492.3 326 70.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 6.5e-137 491.1 319 72.1
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 8.5e-137 490.7 323 71.2
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.5e-136 489.2 318 73.0
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 9.4e-136 487.3 324 71.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.2e-135 486.9 326 69.3
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.2e-135 486.9 326 70.6
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.1e-135 486.1 318 73.0
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.1e-135 486.1 323 72.8
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.7e-135 485.7 326 69.9
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.7e-135 485.0 326 69.3
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 8.0e-135 484.2 326 68.7
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.3e-134 482.6 321 71.3
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.3e-134 482.6 326 68.4
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 4.0e-134 481.9 326 68.7
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 5.2e-134 481.5 312 73.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 6.8e-134 481.1 326 69.0
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.0e-133 479.6 326 69.3
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 4.4e-133 478.4 320 70.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.7e-132 476.5 324 71.3
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.8e-132 475.7 321 70.4
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 3.7e-132 475.3 325 68.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 6.3e-132 474.6 320 71.2
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 8.3e-132 474.2 324 69.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.4e-131 473.4 319 70.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.4e-131 473.4 320 70.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-131 473.4 327 67.9
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-131 473.4 297 74.7
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 4.1e-131 471.9 320 69.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 2.7e-130 469.2 324 69.1
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.9e-129 465.7 318 69.5
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 6.1e-127 458.0 320 66.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 6.8e-126 454.5 323 66.9
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 6.8e-126 454.5 323 66.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 6.8e-126 454.5 323 66.9
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 4.4e-125 451.8 324 65.7
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 5.7e-125 451.4 325 65.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 7.5e-125 451.1 323 66.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 7.5e-125 451.1 323 66.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.7e-124 449.9 328 65.2
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.2e-124 449.5 323 66.3
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.8e-124 449.1 328 65.2
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 8.3e-124 447.6 324 65.7
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.8e-123 446.4 324 65.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.8e-123 446.4 319 65.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.0e-122 443.0 319 66.8
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.9e-121 439.1 318 68.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 6.6e-121 438.0 320 65.0
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 6.6e-121 438.0 317 66.2
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 6.6e-121 438.0 326 65.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-118 430.3 316 65.8
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 8.3e-116 421.0 329 61.1
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.3e-113 413.7 321 64.2
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 4.3e-112 408.7 318 60.7
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.8e-110 403.3 324 61.1
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.7e-105 386.7 306 62.4
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.6e-101 372.9 311 58.8
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.3e-96 355.9 326 55.2
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-93 347.4 204 79.9
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.4e-91 340.5 289 58.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.9e-86 321.6 203 75.4
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.2e-83 312.4 309 51.5
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.7e-82 309.7 306 49.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.0e-81 307.8 305 51.1
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.6e-77 293.1 240 60.8
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-76 290.8 158 87.3
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.2e-76 290.0 199 68.3
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.2e-69 267.7 203 62.6
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.2e-67 259.6 178 67.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-62 244.6 158 76.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.3e-62 242.3 163 68.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.0e-60 235.7 129 82.9
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.4e-54 217.6 243 50.6
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-53 213.4 285 43.9
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-43 180.6 135 63.7
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.2e-43 179.5 122 68.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.4e-43 178.3 132 65.2
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 4.7e-42 176.0 87 88.5
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.6e-29 134.4 76 77.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.4e-27 125.2 118 55.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.8e-22 110.9 300 33.3
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.9e-21 105.9 72 72.2
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.8e-15 87.0 71 60.6
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 7.2e-11 72.4 118 38.1
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 6.8e-09 65.9 133 32.3
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 4.4e-08 63.2 276 25.4
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.7e-08 62.8 214 28.5
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 6.4e-07 59.3 170 27.1
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 8.3e-07 58.9 175 30.3
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 4.1e-06 56.6 183 26.2


User provided reference genes

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