Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.8e-218 762.3 379 100.0
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 4.6e-134 481.9 332 74.1
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.3e-133 479.6 304 81.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 6.4e-128 461.5 319 73.7
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 9.3e-127 457.6 331 70.1
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 1.0e-125 454.1 283 77.4
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.8e-125 453.4 288 77.1
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 5.1e-125 451.8 324 70.7
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 5.1e-125 451.8 338 66.0
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 1.9e-124 449.9 338 66.0
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 4.3e-124 448.7 330 66.7
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 1.6e-123 446.8 331 66.2
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 3.7e-123 445.7 334 68.6
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 4.8e-123 445.3 328 69.2
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 6.2e-123 444.9 325 66.8
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 1.1e-122 444.1 327 68.8
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.4e-122 443.7 334 67.4
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 4.0e-122 442.2 331 67.7
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 4.0e-122 442.2 341 64.2
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 2.6e-121 439.5 325 68.6
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 2.6e-121 439.5 288 74.0
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 4.5e-121 438.7 330 67.6
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 5.8e-121 438.3 350 64.3
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.3e-120 437.2 365 61.4
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 3.8e-120 435.6 331 66.2
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 4.9e-120 435.3 332 65.1
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 6.4e-120 434.9 331 65.3
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 6.4e-120 434.9 332 65.1
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 8.4e-120 434.5 332 64.8
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 1.9e-119 433.3 330 65.5
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 1.9e-119 433.3 320 66.2
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 2.4e-119 433.0 338 63.6
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 3.2e-119 432.6 322 68.3
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 7.1e-119 431.4 335 65.1
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 1.2e-118 430.6 329 66.6
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 2.1e-118 429.9 332 65.1
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 2.1e-118 429.9 330 64.5
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 3.5e-118 429.1 332 64.8
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 4.6e-118 428.7 328 66.2
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 6.0e-118 428.3 330 64.8
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 7.9e-118 427.9 327 65.4
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.0e-117 427.6 330 63.6
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 1.8e-117 426.8 332 63.9
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.8e-117 426.8 332 64.5
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 1.8e-117 426.8 332 64.5
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 2.3e-117 426.4 331 65.6
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.0e-117 426.0 332 65.4
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.0e-117 426.0 332 65.4
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.0e-117 426.0 332 64.5
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.0e-117 426.0 332 64.5
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 5.1e-117 425.2 327 64.5
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 8.7e-117 424.5 332 63.9
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 2.5e-116 422.9 330 63.0
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 3.3e-116 422.5 326 64.7
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 3.3e-116 422.5 326 64.7
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 4.3e-116 422.2 331 62.8
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 4.3e-116 422.2 336 64.9
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 7.4e-116 421.4 330 64.2
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.6e-115 420.2 332 63.6
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 2.1e-115 419.9 332 65.7
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 2.8e-115 419.5 353 61.5
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 6.2e-115 418.3 332 63.3
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.2e-115 418.3 359 58.8
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.1e-114 417.5 359 58.8
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.4e-114 417.2 357 59.1
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 2.4e-114 416.4 328 64.6
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 4.0e-114 415.6 317 66.2
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 6.9e-114 414.8 331 64.7
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.0e-113 413.3 358 58.9
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 3.4e-113 412.5 330 60.9
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 7.6e-113 411.4 284 70.8
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 1.7e-112 410.2 332 60.8
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 2.2e-112 409.8 332 63.9
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 6.5e-112 408.3 287 69.0
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 6.5e-112 408.3 283 70.7
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 1.9e-111 406.8 361 59.6
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 7.1e-111 404.8 332 62.0
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 4.6e-110 402.1 332 62.0
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 2.3e-109 399.8 357 58.3
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 3.0e-109 399.4 290 65.2
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 5.1e-109 398.7 332 59.9
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 1.1e-108 397.5 357 57.4
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 5.7e-108 395.2 331 59.8
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 9.7e-108 394.4 357 57.4
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 3.7e-107 392.5 357 56.6
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 4.8e-107 392.1 330 59.4
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 8.2e-107 391.3 331 59.2
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 1.4e-106 390.6 358 57.0
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 1.5e-105 387.1 336 58.0
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 5.9e-105 385.2 331 58.3
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 5.9e-105 385.2 331 58.3
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.0e-104 384.4 229 82.1
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 1.0e-104 384.4 304 60.9
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 1.7e-104 383.6 331 58.3
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 9.3e-103 377.9 332 59.0
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 7.9e-102 374.8 298 69.1
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 1.8e-101 373.6 324 60.2
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 3.9e-101 372.5 304 60.5
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 1.5e-100 370.5 295 62.0
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 9.7e-100 367.9 357 53.8
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 1.1e-98 364.4 325 57.5
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 1.4e-98 364.0 329 61.7
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 1.8e-98 363.6 297 62.6
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 4.1e-98 362.5 334 55.1
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.5e-97 360.5 328 59.5
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 1.9e-95 353.6 251 70.9
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 9.4e-95 351.3 261 69.0
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 2.1e-94 350.1 293 61.8
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 2.3e-93 346.7 287 57.8
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 3.9e-93 345.9 249 69.9
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 9.1e-90 334.7 359 51.3
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 5.0e-88 328.9 252 65.9
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 5.2e-85 318.9 249 62.7
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.1e-84 317.8 250 62.4
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 1.1e-79 301.2 288 53.5
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 3.7e-75 286.2 330 46.4
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 5.3e-74 282.3 284 48.2
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 3.5e-73 279.6 283 47.3
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 7.7e-73 278.5 310 50.6
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 1.4e-69 267.7 355 42.5
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 1.3e-64 251.1 234 56.8
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 8.9e-61 238.4 304 44.4
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 5.6e-55 219.2 332 41.0
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 2.3e-53 213.8 152 65.8
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 1.1e-45 188.3 280 39.6
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 2.0e-44 184.1 137 66.4
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.4e-37 161.4 195 46.7
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 5.2e-37 159.5 321 33.3
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 7.1e-34 149.1 90 84.4
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.4e-28 130.2 131 51.1
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 7.1e-26 122.5 305 31.8
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.5e-25 120.2 137 49.6
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 1.9e-23 114.4 110 53.6
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 2.5e-23 114.0 172 41.9
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.6e-17 94.7 305 24.9
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 6.2e-14 82.8 89 51.7
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.4e-13 81.6 73 57.5
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 1.8e-13 81.3 45 82.2
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.3e-13 79.7 89 49.4
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 1.0e-08 65.5 84 41.7
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 2.8e-06 57.4 100 39.0


User provided reference genes

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