Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 2.6e-118 428.7 211 100.0
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 1.1e-31 141.0 108 72.2
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 2.5e-28 129.8 96 68.8
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 6.1e-27 125.2 111 62.2
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 2.3e-26 123.2 94 68.1
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 4.4e-25 119.0 101 62.4
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 8.2e-24 114.8 103 62.1
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 1.8e-23 113.6 97 61.9
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 5.3e-23 112.1 114 54.4
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 7.0e-23 111.7 105 58.1
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 9.1e-23 111.3 119 52.1
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 3.5e-22 109.4 98 58.2
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 4.5e-22 109.0 104 59.6
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.9e-22 108.6 92 62.0
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 2.9e-21 106.3 107 53.3
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 2.9e-21 106.3 114 56.1
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 2.9e-21 106.3 114 56.1
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 2.9e-21 106.3 114 56.1
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.9e-21 106.3 94 60.6
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 3.8e-21 105.9 91 63.7
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 3.8e-21 105.9 143 48.3
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 5.0e-21 105.5 90 60.0
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 6.5e-21 105.1 111 51.4
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 6.5e-21 105.1 106 58.5
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 6.5e-21 105.1 106 58.5
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 8.5e-21 104.8 110 52.7
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 8.5e-21 104.8 141 48.2
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-20 104.4 89 62.9
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.1e-20 104.4 94 61.7
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 1.1e-20 104.4 89 62.9
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.1e-20 104.4 89 62.9
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 1.1e-20 104.4 56 82.1
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 1.1e-20 104.4 56 82.1
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.5e-20 104.0 92 58.7
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 1.5e-20 104.0 111 50.5
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.5e-20 104.0 116 52.6
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 2.5e-20 103.2 122 53.3
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 2.5e-20 103.2 93 61.3
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 3.2e-20 102.8 112 50.9
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 4.2e-20 102.4 92 60.9
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 4.2e-20 102.4 91 63.7
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 5.5e-20 102.1 97 58.8
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 5.5e-20 102.1 91 60.4
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 5.5e-20 102.1 115 53.0
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 5.5e-20 102.1 91 60.4
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 7.2e-20 101.7 111 53.2
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 7.2e-20 101.7 94 60.6
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 9.4e-20 101.3 92 56.5
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 9.4e-20 101.3 111 48.6
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.6e-19 100.5 109 56.0
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 2.1e-19 100.1 91 60.4
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 2.1e-19 100.1 92 60.9
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 2.1e-19 100.1 112 54.5
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 2.1e-19 100.1 88 61.4
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 2.1e-19 100.1 96 54.2
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 3.6e-19 99.4 92 59.8
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 3.6e-19 99.4 94 61.7
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 3.6e-19 99.4 95 55.8
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 3.6e-19 99.4 53 84.9
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 4.7e-19 99.0 92 60.9
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 6.1e-19 98.6 81 65.4
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 6.1e-19 98.6 119 47.9
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 6.1e-19 98.6 111 47.7
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 8.0e-19 98.2 95 56.8
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 8.0e-19 98.2 99 55.6
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 8.0e-19 98.2 99 55.6
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 1.4e-18 97.4 68 67.6
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 1.8e-18 97.1 72 63.9
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 3.0e-18 96.3 52 84.6
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 3.0e-18 96.3 95 54.7
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 4.0e-18 95.9 90 58.9
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 5.2e-18 95.5 116 50.9
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 6.7e-18 95.1 102 48.0
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 6.7e-18 95.1 99 53.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 6.7e-18 95.1 90 58.9
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 6.7e-18 95.1 106 50.0
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 6.7e-18 95.1 106 50.0
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 6.7e-18 95.1 56 75.0
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 6.7e-18 95.1 95 57.9
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 1.1e-17 94.4 97 53.6
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.5e-17 94.0 90 57.8
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.6e-17 93.2 111 45.9
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 2.6e-17 93.2 95 51.6
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 3.3e-17 92.8 111 50.5
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 3.3e-17 92.8 84 57.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 1.3e-16 90.9 96 57.3
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.2e-16 90.1 92 54.3
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 1.1e-15 87.8 100 49.0
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 1.4e-15 87.4 62 66.1
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 3.1e-15 86.3 128 46.1
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 5.3e-15 85.5 69 65.2
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 9.1e-15 84.7 62 67.7
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 2.0e-14 83.6 71 59.2
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 2.0e-14 83.6 114 46.5
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 4.5e-14 82.4 99 50.5
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 2.2e-13 80.1 91 54.9
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 2.2e-13 80.1 91 54.9
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.2e-13 80.1 100 50.0
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 3.8e-13 79.3 106 48.1
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 1.5e-12 77.4 82 53.7
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 1.5e-12 77.4 100 43.0
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 2.5e-12 76.6 112 48.2
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 2.5e-12 76.6 102 46.1
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 2.5e-12 76.6 100 42.0
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 7.2e-12 75.1 70 58.6
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 2.1e-11 73.6 70 57.1
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 1.7e-08 63.9 51 62.7
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 2.8e-08 63.2 89 46.1
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 1.8e-07 60.5 87 43.7
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 7.0e-07 58.5 93 39.8
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 1.2e-06 57.8 62 50.0


User provided reference genes

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