Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 1.6e-211 739.2 377 100.0
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 2.8e-184 648.7 359 92.5
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 2.6e-161 572.4 366 80.6
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.2e-160 569.3 363 81.3
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 5.8e-137 491.5 367 70.0
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 3.2e-135 485.7 361 67.3
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.6e-134 483.4 362 69.9
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 1.0e-133 480.7 362 69.6
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 1.1e-132 477.2 373 68.4
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.9e-132 476.5 361 65.4
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.8e-131 472.6 362 66.3
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 2.8e-131 472.6 360 67.8
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 6.2e-131 471.5 377 66.8
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 2.3e-130 469.5 362 66.3
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.3e-130 469.5 365 66.8
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 4.0e-130 468.8 370 65.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 8.9e-130 467.6 371 65.0
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.4e-129 465.7 362 66.6
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 5.8e-129 464.9 370 64.6
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.3e-128 463.8 371 64.4
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.2e-128 463.0 362 65.7
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.9e-128 462.6 361 65.1
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 3.7e-128 462.2 371 64.4
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 3.7e-128 462.2 363 64.2
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 4.9e-128 461.8 361 63.4
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.4e-127 460.3 371 64.7
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 3.2e-127 459.1 370 64.9
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 5.4e-127 458.4 369 65.0
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 7.1e-127 458.0 360 63.1
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 9.2e-127 457.6 370 63.0
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.6e-126 456.8 371 64.7
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 2.1e-126 456.4 370 64.1
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.1e-126 456.4 362 66.0
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.7e-126 456.1 369 65.0
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 4.6e-126 455.3 363 65.0
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 6.0e-126 454.9 370 63.8
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 6.0e-126 454.9 366 60.9
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.0e-125 454.1 371 63.9
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.0e-125 454.1 379 62.8
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 2.3e-125 453.0 370 62.4
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 3.0e-125 452.6 370 64.6
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 3.9e-125 452.2 364 64.3
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 5.1e-125 451.8 347 65.7
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 6.6e-125 451.4 365 62.7
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.1e-124 450.7 364 63.5
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.2e-123 447.2 358 64.2
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.1e-122 444.1 364 63.2
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.4e-122 443.7 361 60.7
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 3.4e-121 439.1 360 62.5
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 5.8e-121 438.3 372 59.1
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 9.9e-121 437.6 363 61.4
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 2.9e-120 436.0 333 66.4
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 4.9e-120 435.3 346 63.6
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.9e-119 433.3 371 61.2
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 4.2e-119 432.2 362 61.6
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.7e-118 429.5 379 59.1
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 4.6e-118 428.7 334 63.5
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 6.0e-118 428.3 363 62.3
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 1.3e-117 427.2 367 59.7
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.3e-117 427.2 368 61.1
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.7e-117 426.8 375 59.5
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 3.9e-117 425.6 358 62.3
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 3.9e-117 425.6 362 61.3
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 9.6e-116 421.0 374 59.1
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 6.2e-115 418.3 379 56.7
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 2.4e-114 416.4 355 60.0
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 2.4e-114 416.4 336 61.0
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 5.3e-114 415.2 362 60.5
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 9.0e-114 414.5 359 59.9
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 5.8e-113 411.8 334 67.7
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 7.6e-113 411.4 361 59.8
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.7e-112 410.2 329 63.8
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 2.2e-112 409.8 364 60.7
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 3.8e-112 409.1 329 64.1
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.9e-111 406.8 327 62.1
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 4.2e-111 405.6 329 63.5
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 5.4e-111 405.2 345 63.2
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 1.6e-110 403.7 357 59.1
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.1e-110 403.3 351 58.7
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 2.7e-110 402.9 355 58.9
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.7e-109 400.2 357 58.8
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 3.9e-109 399.1 339 60.5
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 3.3e-108 396.0 370 58.6
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.4e-106 390.6 332 60.2
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 3.1e-106 389.4 357 58.3
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 2.0e-105 386.7 357 56.0
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 4.2e-103 379.0 346 58.4
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 5.5e-103 378.6 346 58.4
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 4.6e-102 375.6 357 54.9
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 1.0e-101 374.4 347 58.5
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.0e-101 374.4 392 51.8
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.3e-101 373.2 328 59.1
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.3e-101 373.2 328 59.1
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 1.6e-99 367.1 359 54.0
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 7.1e-95 351.7 362 53.6
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 4.3e-92 342.4 251 70.5
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 5.7e-92 342.0 348 49.7
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 7.4e-92 341.7 348 49.7
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.6e-91 340.5 362 53.3
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 4.6e-86 322.4 267 62.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.9e-84 317.0 369 48.8
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.5e-84 316.6 331 51.1
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 3.6e-78 296.2 362 46.4
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 9.7e-76 288.1 281 54.1
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.5e-68 264.2 265 53.2
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.6e-65 253.4 187 71.7
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 3.5e-65 253.1 170 71.2
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.2e-64 250.4 362 44.8
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.6e-62 244.2 275 49.8
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 1.5e-60 237.7 342 42.4
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 3.8e-56 223.0 337 38.3
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.5e-55 221.1 361 40.7
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.5e-44 184.5 329 38.0
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.7e-44 182.6 137 69.3
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.4e-42 177.9 136 66.9
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 7.0e-42 175.6 108 77.8
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 2.6e-36 157.1 372 29.8
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.4e-34 149.4 138 54.3
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 3.0e-32 143.7 257 35.8
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.5e-31 140.6 134 60.4
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.2e-30 136.0 142 54.9
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.5e-28 131.3 114 62.3
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.7e-24 117.9 163 47.9
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 8.6e-24 115.5 109 60.6
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 2.8e-22 110.5 124 47.6
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.8e-21 107.8 206 34.0
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 3.5e-17 93.6 116 43.1
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.8e-13 81.3 134 33.6
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 9.9e-12 75.5 109 45.9
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.1e-07 62.0 141 31.2
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 3.3e-07 60.5 87 47.1
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 3.3e-07 60.5 87 47.1


User provided reference genes

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