Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 5.9e-44 180.6 102 100.0
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 1.4e-16 89.7 102 54.9
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 8.9e-16 87.0 73 67.1
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 9.8e-15 83.6 79 60.8
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 1.7e-14 82.8 75 64.0
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 2.9e-14 82.0 92 51.1
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 6.4e-14 80.9 98 54.1
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 8.3e-14 80.5 85 57.6
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 1.1e-13 80.1 92 55.4
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 1.8e-13 79.3 100 49.0
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 2.4e-13 79.0 98 49.0
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 3.2e-13 78.6 81 56.8
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 3.2e-13 78.6 81 56.8
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 3.2e-13 78.6 78 57.7
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 7.0e-13 77.4 71 59.2
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 9.2e-13 77.0 76 56.6
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 1.2e-12 76.6 87 54.0
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 2.7e-12 75.5 76 55.3
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 6.0e-12 74.3 71 59.2
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 7.8e-12 73.9 71 62.0
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 1.7e-11 72.8 99 45.5
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 2.3e-11 72.4 70 58.6
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 6.6e-11 70.9 97 48.5
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 6.6e-11 70.9 69 58.0
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 8.6e-11 70.5 97 48.5
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 8.6e-11 70.5 88 48.9
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 8.6e-11 70.5 94 46.8
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 1.1e-10 70.1 70 54.3
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 2.5e-10 68.9 70 55.7
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.3e-10 68.2 108 44.4
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.3e-10 68.2 108 44.4
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 5.6e-10 67.8 95 47.4
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 7.3e-10 67.4 94 52.1
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 9.5e-10 67.0 82 47.6
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 9.5e-10 67.0 89 49.4
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 9.5e-10 67.0 101 46.5
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 1.2e-09 66.6 89 48.3
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 2.1e-09 65.9 90 50.0
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 2.1e-09 65.9 70 54.3
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 2.8e-09 65.5 68 55.9
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 3.6e-09 65.1 82 46.3
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 3.6e-09 65.1 71 46.5
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 4.7e-09 64.7 82 46.3
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 4.7e-09 64.7 87 44.8
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 4.7e-09 64.7 82 46.3
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 8.0e-09 63.9 74 48.6
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 8.0e-09 63.9 72 48.6
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 8.0e-09 63.9 88 50.0
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 1.1e-08 63.5 77 45.5
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 1.1e-08 63.5 81 45.7
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 1.8e-08 62.8 82 47.6
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 2.3e-08 62.4 65 52.3
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 2.3e-08 62.4 57 61.4
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 2.3e-08 62.4 69 50.7
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 3.1e-08 62.0 82 45.1
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 4.0e-08 61.6 77 44.2
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 4.0e-08 61.6 77 44.2
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 4.0e-08 61.6 68 50.0
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 5.2e-08 61.2 77 44.2
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 5.2e-08 61.2 70 50.0
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 5.2e-08 61.2 71 47.9
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 5.2e-08 61.2 71 47.9
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 8.9e-08 60.5 77 42.9
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 8.9e-08 60.5 76 46.1
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 1.2e-07 60.1 77 44.2
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 1.2e-07 60.1 69 49.3
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 1.5e-07 59.7 73 46.6
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 2.0e-07 59.3 82 47.6
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 3.4e-07 58.5 69 50.7
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 7.5e-07 57.4 68 45.6
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 9.8e-07 57.0 68 47.1
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 9.8e-07 57.0 103 40.8
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 2.9e-06 55.5 68 44.1
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 3.7e-06 55.1 100 34.0
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 4.9e-06 54.7 70 47.1
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 6.4e-06 54.3 71 42.3


User provided reference genes

Program Settings