Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.1e-45 185.3 89 100.0
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.5e-30 135.2 70 91.4
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 4.2e-30 134.4 70 91.4
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 9.4e-30 133.3 70 90.0
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 1.6e-29 132.5 70 90.0
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.1e-29 132.1 70 88.6
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.1e-29 132.1 70 88.6
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 2.7e-29 131.7 70 90.0
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 2.7e-29 131.7 70 88.6
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 3.6e-29 131.3 70 88.6
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 3.6e-29 131.3 70 88.6
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 4.7e-29 131.0 70 85.7
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 6.1e-29 130.6 70 87.1
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 6.1e-29 130.6 70 87.1
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 6.1e-29 130.6 70 87.1
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 6.1e-29 130.6 70 88.6
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 8.0e-29 130.2 70 85.7
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 1.0e-28 129.8 70 85.7
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.4e-28 129.4 70 87.1
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.8e-28 129.0 70 84.3
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.8e-28 129.0 69 85.5
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.8e-28 129.0 69 88.4
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.8e-28 129.0 69 89.9
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 2.3e-28 128.6 70 85.7
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 2.3e-28 128.6 70 85.7
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 2.3e-28 128.6 74 81.1
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 2.3e-28 128.6 70 87.1
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.3e-28 128.6 70 87.1
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 2.3e-28 128.6 71 84.5
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 2.3e-28 128.6 70 85.7
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 2.3e-28 128.6 69 87.0
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 3.0e-28 128.3 69 85.5
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 4.0e-28 127.9 70 85.7
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 5.2e-28 127.5 70 84.3
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 5.2e-28 127.5 69 85.5
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 6.7e-28 127.1 70 87.1
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 8.8e-28 126.7 70 81.4
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 8.8e-28 126.7 70 84.3
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 8.8e-28 126.7 70 84.3
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.5e-27 125.9 70 82.9
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 1.5e-27 125.9 70 81.4
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.5e-27 125.9 70 82.9
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.5e-27 125.9 70 84.3
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.5e-27 125.9 70 84.3
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.0e-27 125.6 69 82.6
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.6e-27 125.2 70 82.9
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.6e-27 125.2 70 82.9
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 2.6e-27 125.2 70 82.9
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 2.6e-27 125.2 70 82.9
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 3.3e-27 124.8 70 80.0
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 3.3e-27 124.8 70 82.9
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 3.3e-27 124.8 71 84.5
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 4.4e-27 124.4 70 82.9
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 4.4e-27 124.4 70 81.4
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 4.4e-27 124.4 70 84.3
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 4.4e-27 124.4 70 81.4
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 5.7e-27 124.0 70 81.4
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 5.7e-27 124.0 70 84.3
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 7.5e-27 123.6 70 81.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 7.5e-27 123.6 71 80.3
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 9.7e-27 123.2 70 80.0
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 9.7e-27 123.2 70 81.4
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 1.3e-26 122.9 70 80.0
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.3e-26 122.9 70 81.4
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 1.3e-26 122.9 70 81.4
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.7e-26 122.5 70 80.0
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.7e-26 122.5 70 81.4
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 2.2e-26 122.1 70 81.4
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.8e-26 121.7 68 80.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.8e-26 121.7 69 78.3
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 2.8e-26 121.7 69 79.7
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 3.7e-26 121.3 70 78.6
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 3.7e-26 121.3 71 77.5
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 3.7e-26 121.3 70 80.0
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 78.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 4.8e-26 120.9 70 81.4
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 6.3e-26 120.6 70 80.0
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 6.3e-26 120.6 70 78.6
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.1e-25 119.8 70 80.0
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.1e-25 119.8 70 80.0
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.1e-25 119.8 70 80.0
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.1e-25 119.8 68 79.4
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 1.1e-25 119.8 70 78.6
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.1e-25 119.8 69 78.3
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.4e-25 119.4 68 79.4
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.4e-25 119.4 68 80.9
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.8e-25 119.0 69 81.2
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 2.4e-25 118.6 70 77.1
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 3.1e-25 118.2 70 78.6
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 3.1e-25 118.2 70 80.0
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 4.1e-25 117.9 70 75.7
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.1e-25 117.9 70 77.1
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 5.3e-25 117.5 70 78.6
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 7.0e-25 117.1 70 75.7
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 7.0e-25 117.1 70 75.7
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.6e-24 115.9 70 72.9
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 1.6e-24 115.9 66 86.4
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 2.7e-24 115.2 70 75.7
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 7.7e-24 113.6 73 76.7
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.3e-23 112.8 72 76.4
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.8e-23 111.3 70 72.9
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 3.8e-23 111.3 71 74.6
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 8.5e-23 110.2 70 74.3
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.2e-22 108.2 70 71.4
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.6e-19 98.6 70 67.1
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 7.5e-19 97.1 88 59.1
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 7.0e-17 90.5 68 55.9
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 1.6e-16 89.4 68 57.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.0e-16 89.0 68 55.9
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 3.5e-16 88.2 68 54.4
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.5e-14 82.8 69 55.1
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.5e-14 82.8 67 56.7
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 4.2e-14 81.3 43 88.4
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 9.5e-14 80.1 43 86.0
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 9.5e-14 80.1 43 86.0
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 3.6e-13 78.2 63 54.0
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 1.8e-09 65.9 46 60.9
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 1.8e-09 65.9 60 56.7


User provided reference genes

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