Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.2e-131 473.4 270 100.0
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 1.6e-32 144.1 232 52.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.5e-25 120.9 272 40.4
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.2e-24 117.9 195 47.2
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 4.4e-22 109.4 256 41.0
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.1e-20 102.1 269 36.4
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 7.8e-19 98.6 258 34.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 5.1e-18 95.9 184 40.2
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 8.1e-16 88.6 123 43.1
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.1e-15 88.2 131 42.0
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 6.8e-15 85.5 125 32.8
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.2e-14 84.7 128 32.0
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.5e-14 84.3 207 39.1
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 2.0e-14 84.0 138 44.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 9.9e-14 81.6 145 42.1
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 1.7e-13 80.9 124 37.9
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.7e-13 79.7 168 38.1
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 4.9e-13 79.3 265 30.9
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 4.9e-13 79.3 169 37.9
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 8.4e-13 78.6 196 34.7
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.1e-12 78.2 128 40.6
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 1.9e-12 77.4 179 33.5
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.4e-12 77.0 172 40.1
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.4e-12 77.0 200 38.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 3.2e-12 76.6 132 43.2
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 5.4e-12 75.9 240 32.1
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 5.4e-12 75.9 127 40.9
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 1.2e-11 74.7 171 42.1
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.1e-11 73.9 115 50.4
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.1e-11 73.9 260 33.1
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.1e-11 73.9 117 35.0
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 2.1e-11 73.9 99 51.5
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.1e-11 73.9 99 51.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.1e-11 73.9 126 42.9
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-11 73.6 127 43.3
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 3.5e-11 73.2 97 47.4
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.0e-11 72.4 172 38.4
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.8e-11 72.0 117 53.0
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 7.8e-11 72.0 126 38.9
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-10 71.2 126 44.4
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.3e-10 71.2 100 50.0
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.3e-10 71.2 152 40.8
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 1.7e-10 70.9 126 31.7
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-10 70.9 143 43.4
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.3e-10 70.5 110 34.5
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 2.3e-10 70.5 141 39.7
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 3.9e-10 69.7 120 43.3
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 6.6e-10 68.9 125 44.0
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.1e-09 68.2 187 36.9
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 1.5e-09 67.8 69 44.9
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.9e-09 67.4 121 32.2
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.9e-09 67.4 162 37.0
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 2.5e-09 67.0 163 31.9
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 2.5e-09 67.0 136 36.8
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 4.3e-09 66.2 128 40.6
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 5.6e-09 65.9 162 40.1
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 5.6e-09 65.9 165 35.8
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 5.6e-09 65.9 115 44.3
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 7.3e-09 65.5 192 35.9
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 9.6e-09 65.1 124 46.0
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 9.6e-09 65.1 124 46.0
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 9.6e-09 65.1 190 33.7
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 9.6e-09 65.1 163 36.8
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.6e-08 64.3 60 46.7
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.6e-08 64.3 199 33.7
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 2.1e-08 63.9 210 31.9
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 2.8e-08 63.5 126 44.4
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.8e-08 63.5 193 34.2
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 2.8e-08 63.5 85 37.6
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 3.6e-08 63.2 128 39.1
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 3.6e-08 63.2 107 46.7
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 6.2e-08 62.4 121 33.1
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 1.1e-07 61.6 104 45.2
Lj4A728G41 Lonicera japonica HOM05D004728 ORTHO05D002375 1.1e-07 61.6 52 53.8
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 1.1e-07 61.6 155 34.2
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 1.4e-07 61.2 95 34.7
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-07 60.8 104 41.3
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.8e-07 60.8 99 44.4
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-07 60.5 104 47.1
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 2.4e-07 60.5 120 37.5
Phvul.008G177300 Phaseolus vulgaris HOM05D012119 ORTHO05D002375 2.4e-07 60.5 108 42.6
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 2.4e-07 60.5 91 41.8
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 3.1e-07 60.1 127 39.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.1e-07 60.1 95 42.1
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 4.0e-07 59.7 105 45.7
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.0e-07 59.7 105 45.7
Prupe.1G524300 Prunus persica HOM05D004728 ORTHO05D002375 4.0e-07 59.7 75 41.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.2e-07 59.3 186 33.9
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 5.2e-07 59.3 192 26.0
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 5.2e-07 59.3 129 34.9
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.8e-07 58.9 140 26.4
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.8e-07 58.9 140 26.4
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 8.9e-07 58.5 149 42.3
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 8.9e-07 58.5 120 40.8
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.2e-06 58.2 117 36.8
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.2e-06 58.2 105 41.9
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.5e-06 57.8 109 40.4
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-06 57.4 174 32.8
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.0e-06 57.4 113 40.7
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 2.0e-06 57.4 96 34.4
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.6e-06 57.0 178 33.1
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 2.6e-06 57.0 152 35.5
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 3.4e-06 56.6 99 43.4
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.4e-06 56.6 141 35.5
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 4.4e-06 56.2 88 46.6
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 4.4e-06 56.2 117 44.4
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.8e-06 55.8 128 33.6
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.8e-06 55.8 141 34.8
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 5.8e-06 55.8 132 27.3
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 5.8e-06 55.8 120 33.3
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 9.9e-06 55.1 174 32.8
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 9.9e-06 55.1 99 39.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 9.9e-06 55.1 137 33.6
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 9.9e-06 55.1 181 34.3
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 9.9e-06 55.1 105 41.0
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 9.9e-06 55.1 63 42.9
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 9.9e-06 55.1 84 35.7


User provided reference genes

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