Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 4.9e-188 661.0 335 100.0
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 4.6e-162 574.7 335 89.3
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 2.8e-151 538.9 333 84.7
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.0e-145 520.4 330 82.4
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.4e-142 510.0 335 79.1
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 2.0e-133 479.6 335 73.4
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 1.6e-130 469.9 333 71.8
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 1.5e-128 463.4 334 75.1
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 3.3e-128 462.2 319 74.6
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 1.3e-127 460.3 333 72.1
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 2.2e-127 459.5 330 71.2
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 4.8e-127 458.4 317 74.1
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 1.1e-126 457.2 330 69.4
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 4.1e-126 455.3 329 70.8
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 1.7e-124 449.9 319 74.0
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 2.9e-124 449.1 318 74.2
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 2.9e-124 449.1 335 70.7
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 8.5e-124 447.6 335 68.7
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.4e-123 446.8 331 71.0
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 1.4e-123 446.8 335 69.0
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 9.4e-123 444.1 335 68.7
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 1.2e-122 443.7 317 72.2
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 2.7e-122 442.6 317 71.0
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 4.7e-122 441.8 318 72.6
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 7.9e-122 441.0 329 69.9
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 3.9e-121 438.7 333 67.9
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 1.5e-120 436.8 334 68.0
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 1.5e-120 436.8 326 69.0
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.0e-120 436.4 318 69.8
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 3.3e-120 435.6 317 71.3
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 4.4e-120 435.3 335 68.1
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 7.4e-120 434.5 333 65.5
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.3e-119 433.7 335 66.6
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 2.2e-119 433.0 337 66.8
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 8.2e-119 431.0 278 77.3
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 1.1e-118 430.6 359 63.5
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 1.1e-118 430.6 313 70.0
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 1.4e-118 430.3 333 67.9
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 2.4e-118 429.5 331 67.1
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 3.1e-118 429.1 335 66.6
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 4.1e-118 428.7 356 65.4
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 4.1e-118 428.7 357 65.0
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 5.3e-118 428.3 330 67.3
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 1.2e-117 427.2 337 67.7
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 1.6e-117 426.8 329 68.4
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 1.6e-117 426.8 333 67.9
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 2.6e-117 426.0 322 68.9
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 3.5e-117 425.6 326 68.4
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 3.5e-117 425.6 333 66.4
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 3.5e-117 425.6 330 66.4
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 7.7e-117 424.5 324 66.4
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 1.3e-116 423.7 333 64.9
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 1.3e-116 423.7 314 70.1
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 1.7e-116 423.3 329 67.5
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 2.2e-116 422.9 350 64.3
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 2.9e-116 422.5 331 66.8
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 2.9e-116 422.5 330 66.1
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.5e-115 420.2 331 66.2
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 3.2e-115 419.1 330 65.2
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 5.5e-115 418.3 331 65.9
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 5.5e-115 418.3 331 65.6
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.6e-114 416.8 395 58.2
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 2.7e-114 416.0 320 66.2
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 3.6e-114 415.6 333 67.9
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 3.6e-114 415.6 333 64.9
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.3e-113 412.9 356 62.6
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 3.0e-113 412.5 313 69.0
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 3.0e-113 412.5 332 63.9
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 6.7e-113 411.4 372 59.1
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 8.8e-113 411.0 332 63.9
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 1.2e-112 410.6 330 65.2
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 1.5e-112 410.2 330 63.6
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 2.0e-112 409.8 323 65.9
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 2.6e-112 409.5 330 64.5
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 4.4e-112 408.7 323 65.0
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 5.7e-112 408.3 330 63.3
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 2.2e-111 406.4 330 65.2
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.8e-111 406.0 330 65.2
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 2.8e-111 406.0 323 64.7
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 8.2e-111 404.4 279 72.8
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 5.3e-110 401.7 334 64.1
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 7.0e-110 401.4 323 64.1
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 1.6e-109 400.2 358 59.5
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 3.5e-109 399.1 331 64.0
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 1.3e-108 397.1 317 63.1
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.3e-108 397.1 276 74.3
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 5.0e-108 395.2 335 63.3
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 8.5e-108 394.4 317 64.0
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 5.5e-107 391.7 273 72.2
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 9.4e-107 391.0 273 71.8
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 1.6e-106 390.2 277 70.8
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 1.6e-106 390.2 279 70.6
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 2.1e-106 389.8 317 65.6
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 2.7e-106 389.4 315 63.2
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 4.7e-106 388.7 315 62.9
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 6.1e-106 388.3 315 63.8
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 8.0e-106 387.9 315 62.9
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 1.8e-105 386.7 322 62.4
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 3.0e-105 386.0 315 62.5
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 4.0e-105 385.6 297 66.3
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 2.0e-104 383.3 317 62.8
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 2.6e-104 382.9 315 62.2
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 1.3e-103 380.6 316 64.9
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 1.8e-102 376.7 317 61.5
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 3.1e-102 375.9 341 58.1
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 4.1e-102 375.6 315 61.6
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 3.8e-100 369.0 333 60.4
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 5.0e-100 368.6 330 60.3
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 1.1e-99 367.5 315 61.3
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 2.5e-99 366.3 316 60.1
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 7.2e-99 364.8 329 61.1
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.2e-98 364.0 313 61.7
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 1.0e-97 360.9 275 68.0
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 4.0e-97 359.0 312 58.7
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 1.3e-95 354.0 315 59.4
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 2.8e-95 352.8 256 69.5
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 3.7e-95 352.4 318 60.4
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 5.4e-94 348.6 315 58.1
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 1.6e-93 347.1 262 66.8
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 1.6e-93 347.1 336 56.2
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 8.6e-92 341.3 317 56.2
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 2.9e-87 326.2 318 57.5
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.0e-84 316.2 330 54.2
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 8.9e-81 304.7 234 67.9
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 7.0e-78 295.0 233 62.2
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 1.2e-74 284.3 317 50.5
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 6.2e-74 282.0 466 42.1
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 9.9e-72 274.6 315 52.1
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 4.9e-71 272.3 212 64.6
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 1.1e-65 254.6 169 76.9
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 4.4e-64 249.2 212 65.1
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 2.9e-63 246.5 186 68.3
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 7.8e-61 238.4 187 67.4
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 1.5e-59 234.2 194 62.9
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.5e-59 234.2 271 52.4
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 2.8e-58 229.9 204 56.9
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 3.6e-58 229.6 217 59.0
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 1.1e-57 228.0 169 66.9
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 4.0e-57 226.1 169 66.9
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 1.5e-56 224.2 361 40.7
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 2.6e-56 223.4 169 69.2
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 2.6e-56 223.4 224 51.8
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 1.9e-54 217.2 326 43.9
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 9.3e-54 214.9 256 51.2
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 3.9e-52 209.5 179 65.4
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 3.3e-51 206.5 146 71.2
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 5.6e-51 205.7 287 43.9
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 1.3e-50 204.5 141 74.5
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.4e-49 201.1 198 57.6
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 6.9e-49 198.7 221 50.2
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 1.4e-46 191.0 132 72.0
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 2.7e-45 186.8 144 64.6
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 2.2e-39 167.2 318 40.3
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 2.4e-38 163.7 124 65.3
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 3.2e-38 163.3 175 49.1
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 9.3e-38 161.8 123 65.0
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.3e-36 157.9 149 57.7
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 2.0e-32 144.1 180 48.3
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 2.2e-31 140.6 106 70.8
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 5.7e-27 125.9 116 60.3
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 7.4e-27 125.6 116 56.9
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-25 121.7 140 52.1
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 5.9e-24 115.9 131 48.1
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 8.8e-20 102.1 83 61.4
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 9.7e-19 98.6 66 71.2
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 1.4e-17 94.7 83 59.0
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 1.7e-15 87.8 65 66.2
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 5.5e-14 82.8 85 56.5
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 3.6e-13 80.1 65 63.1
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 6.7e-12 75.9 44 81.8
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 8.8e-12 75.5 107 43.0
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 8.8e-12 75.5 87 48.3
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 3.2e-06 57.0 59 54.2


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