Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 5.2e-185 651.0 347 100.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 5.5e-158 561.2 360 80.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.4e-137 492.7 350 73.1
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.8e-130 468.4 341 69.2
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.5e-128 462.2 297 72.7
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.0e-127 460.7 341 66.9
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.3e-127 460.3 347 67.4
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.2e-127 459.5 347 66.3
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.5e-126 456.1 351 65.5
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 3.6e-125 452.2 342 66.7
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 4.7e-125 451.8 298 73.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 8.0e-125 451.1 305 72.5
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.4e-124 450.3 347 64.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.3e-124 449.5 359 63.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.0e-124 449.1 342 66.4
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 3.9e-124 448.7 341 65.1
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 5.2e-124 448.4 357 63.6
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.1e-123 447.2 348 69.0
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.5e-123 446.8 341 66.3
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.0e-123 446.4 357 63.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 7.4e-123 444.5 297 70.7
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.3e-122 443.7 297 72.7
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 8.2e-122 441.0 344 64.5
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.4e-121 439.5 307 68.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.1e-121 439.1 343 62.4
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 3.1e-121 439.1 303 69.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 9.1e-121 437.6 344 62.8
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 3.5e-120 435.6 344 65.1
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.9e-120 434.9 357 62.5
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 7.7e-120 434.5 299 70.6
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.0e-119 434.1 366 60.9
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.3e-119 433.7 297 69.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.7e-119 433.3 297 69.0
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.0e-119 431.8 299 68.6
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 5.0e-119 431.8 339 63.7
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 6.5e-119 431.4 297 68.7
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 8.5e-119 431.0 298 71.5
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 2.5e-118 429.5 297 69.4
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 7.2e-118 427.9 298 67.4
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 7.2e-118 427.9 345 60.6
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-117 426.8 285 71.2
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.1e-117 426.4 297 68.0
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.7e-117 426.0 297 67.7
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.7e-117 425.2 296 67.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 4.7e-117 425.2 341 62.8
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.4e-116 423.7 298 68.1
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.3e-116 422.9 298 68.1
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 3.0e-116 422.5 348 62.1
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 6.8e-116 421.4 342 62.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 8.8e-116 421.0 343 62.7
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.2e-115 420.6 298 66.8
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.5e-115 420.2 301 66.8
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.5e-115 420.2 295 68.1
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.4e-115 419.1 297 67.7
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 4.4e-115 418.7 301 66.8
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 5.7e-115 418.3 298 67.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 5.7e-115 418.3 297 67.0
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.3e-114 417.2 297 67.3
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.7e-114 416.8 297 66.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.7e-114 415.6 296 67.6
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.7e-114 415.6 298 67.4
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 4.8e-114 415.2 297 67.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.3e-114 414.8 298 66.1
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 8.3e-114 414.5 295 67.5
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 1.1e-113 414.1 348 59.2
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.4e-113 413.7 301 65.1
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 1.8e-113 413.3 298 65.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 4.1e-113 412.1 302 66.2
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.1e-113 412.1 345 61.2
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 7.0e-113 411.4 297 66.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.7e-112 409.5 301 64.8
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.7e-111 406.8 345 62.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.2e-110 402.5 313 64.2
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 4.2e-110 402.1 346 61.6
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 5.5e-110 401.7 271 72.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.5e-107 393.7 301 63.5
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.0e-107 393.3 301 63.5
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.2e-106 389.8 305 63.6
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.8e-106 388.7 310 62.9
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 3.1e-105 386.0 302 62.9
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 4.1e-105 385.6 286 66.1
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 5.4e-105 385.2 292 64.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 9.1e-105 384.4 265 70.2
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 9.1e-105 384.4 292 65.1
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 5.9e-104 381.7 303 63.0
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 5.9e-104 381.7 303 63.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 7.7e-104 381.3 287 62.4
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 8.6e-103 377.9 239 75.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.3e-102 375.9 319 59.9
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.2e-102 374.8 325 57.8
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.2e-101 374.0 269 64.3
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.8e-100 370.2 215 79.1
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.4e-99 365.5 303 57.4
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.4e-97 360.5 308 57.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 4.1e-97 359.0 231 70.6
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.6e-96 357.1 268 66.0
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 6.6e-95 351.7 312 58.0
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.4e-91 339.3 294 54.8
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.5e-88 329.3 235 67.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.3e-76 290.0 250 58.8
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.2e-75 287.7 303 50.8
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.9e-73 280.4 227 65.2
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 2.5e-70 270.0 327 41.0
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.9e-68 261.5 284 46.1
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 3.4e-67 259.6 208 58.7
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.3e-66 257.7 298 44.3
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-66 257.7 296 44.6
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 8.7e-63 245.0 184 68.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.5e-62 244.2 184 65.8
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 8.1e-61 238.4 298 44.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 3.3e-54 216.5 247 41.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.9e-49 200.7 274 41.2
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 8.1e-45 185.3 162 56.8
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.1e-44 183.3 311 36.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 9.0e-36 155.2 185 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 7.9e-32 142.1 114 57.0
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.9e-28 129.0 163 46.6
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.2e-18 97.4 106 51.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 2.9e-18 97.1 161 39.1
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.5e-11 74.7 41 78.0
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.5e-09 68.2 101 41.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 4.2e-09 66.6 33 84.8


User provided reference genes

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