Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0182300 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.5e-172 608.2 308 100.0
Rhsim07G0182200 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.8e-105 385.2 310 66.1
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 7.7e-47 191.8 279 39.4
Prupe.3G094000 Prunus persica HOM05D001576 ORTHO05D000401 8.6e-30 135.2 275 34.5
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-25 120.6 289 33.2
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-25 120.6 289 33.2
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-25 120.6 289 33.2
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-25 120.6 289 33.2
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-25 120.6 289 33.2
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-24 115.2 297 31.3
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-24 115.2 283 31.8
CSS0010296 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.6e-23 112.8 283 31.4
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-22 111.7 282 30.5
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.6e-22 109.0 283 31.4
CSS0001664 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.3e-21 106.7 289 30.8
CSS0033894 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-19 99.0 276 30.1
CSS0041981 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-19 99.0 276 30.1
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-18 97.4 289 30.1
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-17 93.6 289 29.4
DCAR_030203 Daucus carota HOM05D001576 ORTHO05D000401 6.4e-17 92.4 287 28.2
MD17G1218600 Malus domestica HOM05D001576 ORTHO05D000401 1.9e-16 90.9 335 26.6
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.2e-16 90.1 283 28.6
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.6e-15 86.3 278 28.1
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.0e-15 85.9 278 28.1
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 6.6e-14 82.4 275 24.4
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.9e-13 80.9 275 24.7
TWI53G1133 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.3e-13 79.0 130 32.3
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.8e-12 77.0 277 25.3
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-11 74.7 302 24.2
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-11 74.7 302 24.2
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-11 73.9 302 24.2
Atru.chr9.790 Acer truncatum HOM05D001576 ORTHO05D026251 4.0e-11 73.2 156 33.3
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 6.8e-11 72.4 293 21.8
TWI23G0007 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.9e-11 72.0 276 26.1
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 1.2e-10 71.6 157 31.8
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-10 71.6 278 28.1
CiPaw.10G155100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-10 71.2 167 30.5
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 2.6e-10 70.5 306 24.5
TWI34G0641 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.6e-10 70.5 276 26.1
TWI09G0456 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.4e-10 69.7 156 30.8
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-10 69.3 296 24.0
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.5e-10 68.9 297 24.6
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 9.9e-10 68.6 85 36.5
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-10 68.6 259 25.9
Dinv25327 Davidia involucrata HOM05D031970 ORTHO05D026251 1.7e-09 67.8 222 27.0
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.9e-09 67.0 275 23.6
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.9e-09 66.2 239 29.3
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 4.9e-09 66.2 278 23.7
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 4.9e-09 66.2 288 27.1
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 4.9e-09 66.2 288 27.1
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 278 26.3
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 1.9e-08 64.3 231 27.7
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 2.4e-08 63.9 288 22.6
QL06p053821 Quercus lobata HOM05D001576 ORTHO05D000401 3.2e-08 63.5 136 29.4
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 7.1e-08 62.4 138 28.3
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 9.2e-08 62.0 293 23.5
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 9.2e-08 62.0 287 23.3
CiPaw.06G026600 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 226 27.4
TWI38G2218 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.0e-07 59.3 109 32.1
Aqoxy3G01274 Aquilegia oxysepala HOM05D001576 ORTHO05D005194 7.8e-07 58.9 119 31.1
Rhsim01G0159900 Rhododendron simsii HOM05D001576 ORTHO05D010219 7.8e-07 58.9 137 26.3
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 1.0e-06 58.5 237 23.2
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-06 58.5 253 24.5
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.8 279 25.4
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.3e-06 57.4 187 26.7
QL06p052750 Quercus lobata HOM05D001576 ORTHO05D000401 2.3e-06 57.4 122 29.5
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.3e-06 57.4 134 26.1
CiPaw.06G027900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-06 57.0 279 25.4
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-06 56.2 282 22.7
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 5.1e-06 56.2 295 21.7
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.1e-06 56.2 302 23.5
CiPaw.01G060300 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 96 31.2
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 6.6e-06 55.8 254 24.0


User provided reference genes

Program Settings