Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0182200 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.8e-163 578.2 309 100.0
Rhsim07G0182300 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.6e-108 395.2 310 66.1
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 4.1e-40 169.5 287 37.3
Prupe.3G094000 Prunus persica HOM05D001576 ORTHO05D000401 8.3e-25 118.6 275 34.9
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-19 99.4 295 29.5
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-19 99.4 295 29.5
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-19 99.4 295 29.5
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-19 99.4 295 29.5
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-19 99.4 295 29.5
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-19 99.0 287 30.0
MD17G1218600 Malus domestica HOM05D001576 ORTHO05D000401 2.0e-18 97.4 137 41.6
CSS0001664 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.9e-17 92.8 295 28.8
DCAR_030203 Daucus carota HOM05D001576 ORTHO05D000401 1.4e-16 91.3 297 27.6
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.9e-16 90.9 289 28.0
CSS0010296 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-16 88.6 289 27.7
CSS0033894 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-15 87.8 277 28.5
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-15 87.8 302 33.4
CSS0041981 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-15 87.8 277 28.5
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-15 87.0 306 27.1
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-15 87.0 286 28.0
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-15 86.7 295 31.2
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.1e-14 82.8 289 33.2
TWI53G1133 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.4e-10 69.7 147 29.9
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 2.2e-09 67.4 291 24.1
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 2.2e-09 67.4 291 24.1
Atru.chr9.790 Acer truncatum HOM05D001576 ORTHO05D026251 8.4e-09 65.5 133 33.8
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-08 64.3 146 30.8
Dinv25327 Davidia involucrata HOM05D031970 ORTHO05D026251 1.9e-08 64.3 223 34.5
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.9e-08 64.3 124 33.9
TWI34G0641 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-08 63.9 284 27.1
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-08 63.9 286 25.5
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.2e-08 63.5 189 29.1
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 3.2e-08 63.5 294 23.5
TWI23G0007 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.2e-08 63.5 278 24.1
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.2e-08 63.5 286 25.5
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 4.2e-08 63.2 87 36.8
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-08 63.2 308 24.0
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-08 63.2 308 24.0
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-08 62.8 152 30.3
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.1e-08 62.4 308 24.7
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-07 61.6 294 22.8
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 1.2e-07 61.6 188 28.2
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-07 61.2 124 30.6
CiPaw.07G178300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-07 61.2 154 30.5
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-07 60.8 253 25.3
CiPaw.10G155100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-07 60.8 124 31.5
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 152 30.3
CiPaw.14G134600 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 152 30.3
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 152 30.3
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 190 26.3
CiPaw.09G014300 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 152 30.3
CiPaw.10G139700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 152 30.3
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-07 59.3 196 29.6
CiPaw.10G067400 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-07 59.3 185 27.0
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 152 30.9
SGA_v2.0_scaffold19G08588 Striga asiatica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 291 22.3
CiPaw.03G069900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 145 29.0
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.8 123 33.3
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.8 123 33.3
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.4 280 25.4
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-06 56.2 123 32.5
CiPaw.16G070300 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-06 56.2 152 30.3
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 6.6e-06 55.8 204 28.9
CiPaw.03G152100 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 145 29.7
Dinv10436 Davidia involucrata HOM05D031970 ORTHO05D026251 8.7e-06 55.5 157 41.4


User provided reference genes

Program Settings