Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0175500 Rhododendron simsii HOM05D006905 ORTHO05D003398 1.7e-227 792.3 406 100.0
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 2.5e-61 240.4 161 76.4
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 3.6e-44 183.3 159 61.0
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 1.9e-40 171.0 165 65.5
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 6.0e-39 166.0 160 58.1
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 1.0e-38 165.2 159 58.5
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 1.7e-38 164.5 163 61.3
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 6.6e-38 162.5 161 55.9
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 8.6e-38 162.2 163 62.0
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 9.5e-37 158.7 143 58.7
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 1.2e-36 158.3 161 55.3
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 2.1e-36 157.5 134 68.7
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 3.6e-36 156.8 161 54.0
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 6.2e-36 156.0 161 56.5
Haze_04329 Corylus avellana HOM05D006905 ORTHO05D003398 8.1e-36 155.6 142 58.5
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 8.1e-36 155.6 161 54.7
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 1.1e-35 155.2 160 56.2
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 1.1e-35 155.2 163 51.5
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 1.1e-35 155.2 160 53.8
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 1.4e-35 154.8 160 53.8
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 2.4e-35 154.1 166 53.6
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 3.1e-35 153.7 161 52.8
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 3.1e-35 153.7 163 53.4
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 8.9e-35 152.1 160 51.9
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 1.2e-34 151.8 138 56.5
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 1.2e-34 151.8 163 51.5
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 1.5e-34 151.4 160 51.9
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.0e-34 151.0 161 52.2
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.6e-34 150.6 159 53.5
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 2.6e-34 150.6 159 52.8
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.4e-34 150.2 159 52.8
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.4e-34 150.2 161 51.6
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 5.8e-34 149.4 161 53.4
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 5.8e-34 149.4 136 60.3
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 7.6e-34 149.1 157 52.9
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 1.7e-33 147.9 164 47.0
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 3.8e-33 146.7 162 50.6
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 1.1e-32 145.2 160 51.9
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 1.1e-32 145.2 108 66.7
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 1.4e-32 144.8 161 54.0
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 1.9e-32 144.4 135 57.0
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 2.4e-32 144.1 160 52.5
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 5.4e-32 142.9 109 67.9
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 5.4e-32 142.9 110 69.1
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 5.4e-32 142.9 110 69.1
MELO3C004363.2 Cucumis melo HOM05D006905 ORTHO05D003398 2.1e-31 141.0 160 52.5
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 4.6e-31 139.8 108 62.0
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 4.6e-31 139.8 108 62.0
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 6.0e-31 139.4 109 64.2
Lj5g0004067 Lotus japonicus HOM05D006905 ORTHO05D003398 7.8e-31 139.0 110 64.5
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 1.0e-30 138.7 107 60.7
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 1.7e-30 137.9 109 66.1
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 3.0e-30 137.1 134 55.2
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 5.1e-30 136.3 109 64.2
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 1.5e-29 134.8 110 60.9
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.9e-29 134.4 169 47.3
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 3.3e-29 133.7 173 44.5
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 7.3e-29 132.5 109 59.6
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 7.3e-29 132.5 108 62.0
Glyma.20G227801 Glycine max HOM05D006905 ORTHO05D003398 9.6e-29 132.1 108 57.4
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 1.3e-28 131.7 109 60.6
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 1.3e-28 131.7 110 61.8
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 3.6e-28 130.2 163 46.6
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 1.1e-27 128.6 109 59.6
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 1.4e-27 128.3 163 44.2
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 2.4e-27 127.5 109 56.9
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 2.4e-27 127.5 109 57.8
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 9.0e-27 125.6 109 56.9
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 2.6e-26 124.0 108 58.3
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 5.8e-26 122.9 173 42.2
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 2.9e-25 120.6 174 47.1
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 8.4e-25 119.0 159 42.8
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 8.4e-25 119.0 110 54.5
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 1.9e-24 117.9 161 43.5
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 4.2e-24 116.7 109 53.2
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 9.3e-24 115.5 110 51.8
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 1.6e-23 114.8 112 52.7
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 2.7e-23 114.0 109 51.4
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 2.7e-23 114.0 108 50.0
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 2.7e-23 114.0 106 50.9
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 3.5e-23 113.6 142 45.1
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 7.8e-23 112.5 162 41.4
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 1.0e-22 112.1 112 50.9
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 1.0e-22 112.1 112 50.9
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 1.1e-21 108.6 108 50.9
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 2.5e-21 107.5 110 50.0
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.8e-20 103.2 108 49.1
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 2.4e-19 100.9 108 46.3
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 9.0e-19 99.0 117 45.3
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.2e-18 98.6 161 41.0
Gohir.A08G226300 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.2e-18 98.6 83 61.4
Psat6g147000 Pisum sativum HOM05D002360 ORTHO05D006297 7.6e-18 95.9 82 57.3
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 2.9e-17 94.0 62 69.4
Potri.013G037050 Populus trichocarpa HOM05D006905 ORTHO05D003398 1.6e-15 88.2 123 44.7
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 6.0e-15 86.3 105 45.7
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 3.0e-14 84.0 67 55.2
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 5.1e-14 83.2 69 53.6
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 8.7e-14 82.4 62 59.7
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 5.6e-13 79.7 99 40.4
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 7.4e-13 79.3 69 52.2
Nn1g01647 Nelumbo nucifera HOM05D007525 ORTHO05D003398 2.5e-08 64.3 141 31.2
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 7.1e-08 62.8 144 33.3
Gohir.A01G104050 Gossypium hirsutum HOM05D006905 ORTHO05D003398 9.3e-08 62.4 116 39.7
Carub.0004s2880 Capsella rubella HOM05D007525 ORTHO05D003398 6.0e-07 59.7 138 32.6
PSO478G5123 Papaver somniferum HOM05D007525 ORTHO05D003398 6.0e-07 59.7 141 34.0
CSS0031135 Camellia sinensis var. sinensis HOM05D007525 ORTHO05D003398 7.9e-07 59.3 180 31.7
Lsat_1_v5_gn_3_138380 Lactuca sativa HOM05D007525 ORTHO05D003398 7.9e-07 59.3 157 31.2
Mapoly0153s0018 Marchantia polymorpha HOM05D007525 ORTHO05D003398 7.9e-07 59.3 154 28.6
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 1.0e-06 58.9 145 30.3
Rhsim07G0011500 Rhododendron simsii HOM05D001943 ORTHO05D001969 1.3e-06 58.5 141 33.3
VMungo0331G0679 Vigna mungo HOM05D007525 ORTHO05D003398 1.3e-06 58.5 148 29.7
Haze_15550 Corylus avellana HOM05D007525 ORTHO05D003398 1.8e-06 58.2 223 28.3
ATR0661G217 Amborella trichopoda HOM05D007525 ORTHO05D003398 3.9e-06 57.0 141 29.8
Manes.05G030450 Manihot esculenta HOM05D007525 ORTHO05D003398 5.1e-06 56.6 123 33.3
Duzib133G0712 Durio zibethinus HOM05D007525 ORTHO05D003398 6.7e-06 56.2 140 31.4
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 6.7e-06 56.2 89 36.0
Cfa003884 Carpinus fangiana HOM05D007525 ORTHO05D003398 8.7e-06 55.8 157 30.6
MELO3C021185.2 Cucumis melo HOM05D007525 ORTHO05D003398 8.7e-06 55.8 139 30.9
CsaV3_6G000860 Cucumis sativus L. HOM05D007525 ORTHO05D003398 8.7e-06 55.8 139 29.5
GSVIVG01026980001 Vitis vinifera HOM05D007525 ORTHO05D003398 8.7e-06 55.8 174 27.6


User provided reference genes

Program Settings