Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0168100 Rhododendron simsii HOM05D000290 ORTHO05D008298 8.3e-67 256.9 131 100.0
Rhsim07G0167800 Rhododendron simsii HOM05D000290 ORTHO05D008298 9.6e-47 190.3 117 82.9
vmacro05114 Vaccinium macrocarpon HOM05D000290 ORTHO05D008298 9.9e-44 180.3 117 81.2
Actinidia14143 Actinidia chinensis HOM05D000290 ORTHO05D008298 3.8e-35 151.8 117 66.7
Dinv10141 Davidia involucrata HOM05D000290 ORTHO05D008298 1.6e-33 146.4 117 65.8
Lj7C741G3 Lonicera japonica HOM05D000290 ORTHO05D008298 2.3e-32 142.5 117 59.0
Haze_21360 Corylus avellana HOM05D000290 ORTHO05D008298 7.4e-31 137.5 117 59.8
Haze_21366 Corylus avellana HOM05D000290 ORTHO05D008298 7.4e-31 137.5 117 59.8
Cfa013005 Carpinus fangiana HOM05D000290 ORTHO05D008298 9.6e-31 137.1 117 60.7
GSVIVG01036033001 Vitis vinifera HOM05D000290 ORTHO05D008298 1.3e-30 136.7 117 62.4
PGR044G1628 Punica granatum HOM05D000290 ORTHO05D008298 1.1e-29 133.7 117 60.7
CiPaw.07G233600 Carya illinoinensis HOM05D000290 ORTHO05D008298 1.4e-29 133.3 117 58.1
MD08G1050200 Malus domestica HOM05D000290 ORTHO05D008298 4.0e-29 131.7 117 61.5
Manes.03G006200 Manihot esculenta HOM05D000290 ORTHO05D008298 9.0e-29 130.6 117 59.8
SGA_v2.0_scaffold4G02159 Striga asiatica HOM05D000290 ORTHO05D008298 1.2e-28 130.2 108 61.1
Cc00_g02670 Coffea canephora HOM05D000290 ORTHO05D008298 1.5e-28 129.8 99 65.7
Gorai.009G065400 Gossypium raimondii HOM05D000290 ORTHO05D008298 1.5e-28 129.8 117 58.1
Prupe.1G398500 Prunus persica HOM05D000290 ORTHO05D008298 3.4e-28 128.6 117 59.0
Gohir.A05G062200 Gossypium hirsutum HOM05D000290 ORTHO05D008298 1.3e-27 126.7 117 58.1
FvH4_2g41400 Fragaria vesca HOM05D000290 ORTHO05D008298 1.7e-27 126.3 117 57.3
FAN15G2489 Fragaria x ananassa HOM05D000290 ORTHO05D008298 1.7e-27 126.3 117 57.3
Migut.E01437 Erythranthe guttata HOM05D000290 ORTHO05D008298 2.2e-27 125.9 118 59.3
Potri.018G014000 Populus trichocarpa HOM05D000290 ORTHO05D008298 2.9e-27 125.6 118 55.9
RcHm_v2.0_Chr6g0299071 Rosa chinensis HOM05D000290 ORTHO05D008298 2.9e-27 125.6 118 60.2
Sed0026921 Sechium edule HOM05D000290 ORTHO05D008298 3.8e-27 125.2 110 60.9
MELO3C011316.2 Cucumis melo HOM05D000290 ORTHO05D008298 4.9e-27 124.8 119 58.0
HanXRQChr17g0537191 Helianthus annuus HOM05D000290 ORTHO05D008298 4.9e-27 124.8 118 55.9
Sabra18G0017700 Salix brachista HOM05D000290 ORTHO05D008298 6.4e-27 124.4 118 54.2
CANSAT25G2474 Cannabis sativa HOM05D000290 ORTHO05D008298 1.4e-26 123.2 115 56.5
CsaV3_2G032630 Cucumis sativus L. HOM05D000290 ORTHO05D008298 1.4e-26 123.2 119 57.1
FAN27G0560 Fragaria x ananassa HOM05D000290 ORTHO05D008298 1.4e-26 123.2 117 56.4
Eucgr.C04023 Eucalyptus grandis HOM05D000290 ORTHO05D008298 1.9e-26 122.9 99 65.7
QL02p017911 Quercus lobata HOM05D000290 ORTHO05D008298 1.9e-26 122.9 130 53.1
Glyma.06G059800 Glycine max HOM05D000290 ORTHO05D008298 3.2e-26 122.1 113 56.6
MBI16_g09338_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D008298 3.2e-26 122.1 118 55.9
Sc23g0006290 Simmondsia chinensis HOM05D000290 ORTHO05D008298 4.2e-26 121.7 131 49.6
DCAR_024369 Daucus carota HOM05D000290 ORTHO05D008298 7.1e-26 120.9 117 54.7
Lsat_1_v5_gn_3_23500 Lactuca sativa HOM05D000290 ORTHO05D008298 7.1e-26 120.9 117 55.6
ClCG08G013850 Citrullus lanatus HOM05D000290 ORTHO05D008298 9.3e-26 120.6 120 58.3
Lj1g0014218 Lotus japonicus HOM05D000290 ORTHO05D008298 1.6e-25 119.8 109 58.7
Gohir.A06G104000 Gossypium hirsutum HOM05D000290 ORTHO05D008298 2.1e-25 119.4 117 56.4
Nitab4.5_0000341g0060 Nicotiana tabacum HOM05D000290 ORTHO05D008298 2.1e-25 119.4 111 58.6
Ciclev10010214m.g Citrus clementina HOM05D000290 ORTHO05D008298 2.7e-25 119.0 117 56.4
Solyc08g068920.4 Solanum lycopersicum HOM05D000290 ORTHO05D008298 2.7e-25 119.0 111 58.6
Sopen08g022600 Solanum pennellii HOM05D000290 ORTHO05D008298 2.7e-25 119.0 111 58.6
Glyma.04G059100 Glycine max HOM05D000290 ORTHO05D008298 3.5e-25 118.6 113 54.9
Lalb_Chr11g0063471 Lupinus albus HOM05D000290 ORTHO05D008298 6.0e-25 117.9 111 56.8
PSO170G1117 Papaver somniferum HOM05D000290 ORTHO05D008298 6.0e-25 117.9 112 54.5
Ca_15791_v3 Cicer arietinum L. HOM05D000290 ORTHO05D008298 7.9e-25 117.5 113 54.9
Atru.BG.5.p Acer truncatum HOM05D000290 ORTHO05D008298 1.3e-24 116.7 98 63.3
Phvul.009G085500 Phaseolus vulgaris HOM05D000290 ORTHO05D008298 1.8e-24 116.3 113 54.0
CAN.G273.8 Capsicum annuum HOM05D000290 ORTHO05D008298 2.3e-24 115.9 111 58.6
TPR.G1883 Trifolium pratense HOM05D000290 ORTHO05D008298 2.3e-24 115.9 111 55.9
COL.COLO4_18991 Corchorus olitorius HOM05D000290 ORTHO05D008298 3.0e-24 115.5 115 53.0
Gohir.D06G105800 Gossypium hirsutum HOM05D000290 ORTHO05D008298 3.0e-24 115.5 118 55.9
Gorai.010G120400 Gossypium raimondii HOM05D000290 ORTHO05D008298 3.0e-24 115.5 118 55.9
ATR0580G105 Amborella trichopoda HOM05D000290 ORTHO05D008298 6.7e-24 114.4 125 49.6
PSO063G1469 Papaver somniferum HOM05D000290 ORTHO05D008298 1.1e-23 113.6 112 53.6
Medtr3g105760 Medicago truncatula HOM05D000290 ORTHO05D008298 1.5e-23 113.2 126 52.4
Oeu006853.1 Olea europaea HOM05D000290 ORTHO05D008298 2.5e-23 112.5 153 44.4
Aqoxy7G02930 Aquilegia oxysepala HOM05D000290 ORTHO05D008298 7.4e-23 110.9 108 54.6
Aa31LG11G4140 Aethionema arabicum HOM05D000290 ORTHO05D008298 9.6e-23 110.5 116 55.2
EL10Ac2g02437 Beta vulgaris HOM05D000290 ORTHO05D008298 1.6e-22 109.8 120 50.8
VMungo1309G1149 Vigna mungo HOM05D000290 ORTHO05D008298 2.1e-22 109.4 113 51.3
Cpa.g.sc40.20 Carica papaya HOM05D000290 ORTHO05D008298 2.8e-22 109.0 113 53.1
AUR62037695 Chenopodium quinoa HOM05D000290 ORTHO05D008298 3.7e-22 108.6 126 49.2
BolC7t44809H Brassica oleracea HOM05D000290 ORTHO05D008298 8.1e-22 107.5 116 55.2
Thhalv10003765m.g Eutrema salsugineum HOM05D000290 ORTHO05D008298 1.1e-21 107.1 113 55.8
A06p35730 Brassica napus HOM05D000290 ORTHO05D008298 1.8e-21 106.3 120 51.7
BolC2t12046H Brassica oleracea HOM05D000290 ORTHO05D008298 3.1e-21 105.5 117 54.7
CARHR188460 Cardamine hirsuta HOM05D000290 ORTHO05D008298 3.1e-21 105.5 116 54.3
BraA06t26497Z Brassica rapa HOM05D000290 ORTHO05D008298 4.0e-21 105.1 120 50.8
SalBow8G0275 Salvia bowleyana HOM05D000290 ORTHO05D008298 5.3e-21 104.8 100 53.0
C02p59880 Brassica napus HOM05D000290 ORTHO05D008298 6.9e-21 104.4 101 57.4
Duzib187G0924 Durio zibethinus HOM05D000223 ORTHO05D008298 6.9e-21 104.4 117 47.9
THA.LOC104803329 Tarenaya hassleriana HOM05D000290 ORTHO05D008298 6.9e-21 104.4 118 54.2
AT5G24970 Arabidopsis thaliana HOM05D000290 ORTHO05D008298 1.2e-20 103.6 102 57.8
C07p42810 Brassica napus HOM05D000290 ORTHO05D008298 1.2e-20 103.6 120 50.8
Sp2g22500 Schrenkiella parvula HOM05D000290 ORTHO05D008298 1.5e-20 103.2 121 49.6
Carub.0006s2283 Capsella rubella HOM05D000290 ORTHO05D008298 2.0e-20 102.8 102 56.9
unitig_46.g18220 Utricularia gibba HOM05D000290 ORTHO05D008298 1.3e-19 100.1 94 56.4
Gohir.D05G064700 Gossypium hirsutum HOM05D000290 ORTHO05D008298 1.7e-19 99.8 93 57.0
HPP92_021959 Vanilla planifolia HOM05D000290 ORTHO05D008298 1.7e-19 99.8 98 55.1
HPP92_021994 Vanilla planifolia HOM05D000290 ORTHO05D008298 2.2e-19 99.4 98 54.1
SHI21097 Sapria himalayana HOM05D000290 ORTHO05D008298 2.9e-19 99.0 96 57.3
AL6G36630 Arabidopsis lyrata HOM05D000290 ORTHO05D008298 4.9e-19 98.2 102 53.9
TWI63G1288 Tripterygium wilfordii HOM05D000290 ORTHO05D008298 4.9e-19 98.2 115 47.0
Ah.12g060370 Amaranthus hybridus HOM05D000290 ORTHO05D008298 1.4e-18 96.7 99 53.5
TAR383G0030 Trochodendron aralioides HOM05D000290 ORTHO05D008298 1.4e-18 96.7 92 60.9
Nn8g40890 Nelumbo nucifera HOM05D000290 ORTHO05D008298 1.9e-18 96.3 117 53.0
Thecc.09G011600 Theobroma cacao HOM05D000290 ORTHO05D008298 4.6e-17 91.7 93 52.7
A02p39990 Brassica napus HOM05D000290 ORTHO05D008298 6.0e-17 91.3 126 46.8
BraA02t08962Z Brassica rapa HOM05D000290 ORTHO05D008298 6.0e-17 91.3 126 46.8
AUR62020309 Chenopodium quinoa HOM05D000290 ORTHO05D008298 1.5e-15 86.7 172 35.5
MBI19_g01202_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.2e-14 80.9 94 50.0
Mapoly0011s0039 Marchantia polymorpha HOM05D000290 ORTHO05D008298 4.1e-13 78.6 128 37.5
AagrBONN_evm.TU.Sc2ySwM_228.536__537 Anthoceros agrestis HOM05D000290 ORTHO05D008298 1.5e-12 76.6 102 44.1
Peaxi162Scf00288g00513 Petunia axillaris HOM05D000290 ORTHO05D024831 5.9e-12 74.7 81 53.1
SMO356G0127 Selaginella moellendorffii HOM05D000290 ORTHO05D008298 5.0e-11 71.6 114 36.0
Duzib168G0098 Durio zibethinus HOM05D000290 ORTHO05D008298 2.7e-09 65.9 53 56.6
Pp3c21_15420 Physcomitrium patens HOM05D000290 ORTHO05D008298 3.9e-08 62.0 153 32.0


User provided reference genes

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